Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AC069431.2-201ENST00000604149 1099 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AL137843.1-201ENST00000605078 385 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AL391834.2-201ENST00000609982 546 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AC012531.5-201ENST00000611375 151 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AC006386.2-201ENST00000624491 75 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 AC012005.1-201ENST00000624575 75 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 MTND5P31-201ENST00000419366 1374 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 ELL2P4-201ENST00000446870 1376 ntBASIC3.25□□□□□ -1.89
SMIM28A0A1B0GU29 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AC011978.2-201ENST00000569835 2054 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 RNU6-839P-201ENST00000363347 108 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 SNORD56.3-201ENST00000363507 71 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 RNU6-236P-201ENST00000363886 106 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 SNORD116-23-201ENST00000384645 92 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 MIR217-201ENST00000384817 110 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 BTBD10P2-201ENST00000404779 676 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 RPS7P13-201ENST00000413955 498 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 COTL1P1-201ENST00000422309 375 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AC022018.1-201ENST00000430685 241 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AC112492.1-201ENST00000449607 712 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 MRPL42P4-201ENST00000453267 443 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 RN7SL442P-201ENST00000473804 320 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AC005921.1-201ENST00000510589 286 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 MTCO3P15-201ENST00000526563 574 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AP000790.1-201ENST00000528891 737 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AC044913.1-201ENST00000557200 430 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AL033523.1-201ENST00000605153 153 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AL158050.2-201ENST00000605336 568 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AL583856.2-201ENST00000606298 543 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AL139022.2-201ENST00000606934 443 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 CYCSP41-201ENST00000616920 296 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AC007318.2-201ENST00000620999 243 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AC104985.3-201ENST00000623479 597 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 AL137790.1-201ENST00000634283 177 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 MTND5P28-201ENST00000438005 1594 ntBASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SMIM28A0A1B0GU29 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 RNU6-582P-201ENST00000362989 107 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 SNORA80A-201ENST00000363922 136 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 RNU6-707P-201ENST00000364647 95 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 SNORD6-201ENST00000365444 73 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 RNU6-441P-201ENST00000384545 106 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AC073264.1-201ENST00000411508 416 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 EEF1A1P41-201ENST00000414667 207 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 FCF1P2-201ENST00000415284 583 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 RPS3AP9-201ENST00000417027 792 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AL449283.1-202ENST00000418249 604 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AC245291.1-201ENST00000419501 328 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 PSMA2P3-201ENST00000429685 675 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AL831737.1-201ENST00000441288 271 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 HMGN2P7-201ENST00000456186 273 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 RPS29P26-201ENST00000477483 171 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AC092451.1-201ENST00000480211 153 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AC078918.1-201ENST00000498515 228 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AC097462.2-201ENST00000504623 481 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 SNORA70.14-201ENST00000516205 110 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 RNA5SP135-201ENST00000517019 125 ntBASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.23□□□□□ -1.89
SMIM28A0A1B0GU29 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms