Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AC116096.1-201ENST00000566804 2314 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 RNA5SP509-201ENST00000364577 119 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 SNORA40.3-201ENST00000390964 122 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 RN7SKP167-201ENST00000411047 285 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 AC004690.1-201ENST00000418216 328 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 RPL21P66-201ENST00000426566 466 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 USP9YP29-201ENST00000445112 563 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 snoU13.4-201ENST00000458916 104 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 SNORD42A-201ENST00000459584 64 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 ARL2BPP4-201ENST00000506854 471 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 AC004062.1-201ENST00000509926 645 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 RNA5SP360-201ENST00000516555 118 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 AC022616.6-201ENST00000520479 119 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 AL356432.3-201ENST00000568952 465 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 MIR4697-201ENST00000582977 78 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 MIR3611-201ENST00000584484 83 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 AC008759.1-201ENST00000589783 983 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 SEPT7P9-203ENST00000604116 343 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 AC091979.2-201ENST00000607514 214 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 AC092656.1-203ENST00000624134 423 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 AC006065.6-201ENST00000625201 545 ntBASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
COL4A3BPQ9Y5P4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 OR6C69P-201ENST00000394268 893 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AC078974.1-201ENST00000411597 223 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 BX890604.2-201ENST00000427883 474 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 VN1R108P-201ENST00000431580 830 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 RPEP2-201ENST00000432149 701 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AC011998.1-201ENST00000433403 117 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AC004866.2-201ENST00000438285 481 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AL049734.2-201ENST00000441066 616 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 CFTRP1-201ENST00000456646 183 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 RPL7P15-201ENST00000461190 712 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 RN7SL385P-201ENST00000468873 276 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AC012158.1-204ENST00000483430 465 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 LARP1BP2-201ENST00000486594 519 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AC055855.1-201ENST00000489563 579 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AP003467.2-201ENST00000520175 319 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 MIR3682-201ENST00000581338 84 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AL022099.1-201ENST00000604551 712 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AC010201.1-201ENST00000605051 540 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 RNU6-87P-201ENST00000607561 108 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AC131902.3-201ENST00000611767 581 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AC008250.2-201ENST00000615261 205 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 AL590240.3-201ENST00000621416 943 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 USP8P1-201ENST00000494673 3183 ntBASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.95□□□□□ -1.62
COL4A3BPQ9Y5P4 TEX21P-201ENST00000447107 1476 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 RNU6-223P-201ENST00000362830 107 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 AC068538.1-201ENST00000376856 336 ntBASIC4.94□□□□□ -1.62
COL4A3BPQ9Y5P4 RNU6-432P-201ENST00000384196 109 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms