Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC093227.2-201ENST00000589357 285 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 AC012119.1-201ENST00000603184 222 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 AL390123.1-201ENST00000603216 237 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 RAC1P9-201ENST00000604990 392 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 AC007529.1-201ENST00000418574 2178 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 AC010329.2-201ENST00000595195 2737 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 IQCB2P-201ENST00000401788 1633 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AC125336.1-201ENST00000508893 2827 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AC138393.1-203ENST00000327086 343 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 OR10R3P-201ENST00000361688 942 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 RNU2-21P-201ENST00000410368 188 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 DPPA2P2-201ENST00000418220 897 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 RPS15AP40-201ENST00000419621 391 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AC007568.1-201ENST00000422912 471 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AL158071.1-201ENST00000430315 461 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AL353662.1-201ENST00000439099 327 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 snoU109.4-201ENST00000458953 143 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 snoU13.29-201ENST00000459370 104 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AC018638.3-201ENST00000461273 132 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 RN7SL221P-201ENST00000466190 281 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AC012123.2-201ENST00000485809 248 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 SNORA70.11-201ENST00000515987 138 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 SNORA70.13-201ENST00000516116 138 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 RNA5SP434-201ENST00000516647 121 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 RNA5SP340-201ENST00000517132 107 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 IGHV1-14-201ENST00000523391 241 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AP005639.1-201ENST00000526939 192 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 GSTP1P1-201ENST00000548078 319 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 ELOCP5-201ENST00000604924 333 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AC006329.2-201ENST00000611491 394 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 AC024587.1-201ENST00000505925 2157 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 HSPA8P4-201ENST00000511877 1920 ntBASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HRH3Q9Y5N1 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 RNY1P16-201ENST00000363063 111 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 RNU1-59P-201ENST00000364829 162 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 Y_RNA.416-201ENST00000384014 113 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 HMGB1P20-201ENST00000402555 677 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 AL133396.1-201ENST00000432048 687 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 ATP5LP2-201ENST00000440646 311 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 DAP3P1-201ENST00000441522 278 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 FCF1P4-201ENST00000448326 183 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 RPS3AP46-201ENST00000448352 682 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 CHEK2P4-201ENST00000450340 246 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 VPS25P1-201ENST00000455691 508 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 VN1R105P-201ENST00000486595 910 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms