Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
AP4S1Q9Y587 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.17□□□□□ -2.06
AP4S1Q9Y587 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
AP4S1Q9Y587 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
AP4S1Q9Y587 AL024507.1-201ENST00000412741 274 ntBASIC2.17□□□□□ -2.06
AP4S1Q9Y587 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.17□□□□□ -2.06
AP4S1Q9Y587 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.17□□□□□ -2.06
AP4S1Q9Y587 TOMM22P1-201ENST00000418578 312 ntBASIC2.17□□□□□ -2.06
AP4S1Q9Y587 COTL1P1-201ENST00000422309 375 ntBASIC2.17□□□□□ -2.06
AP4S1Q9Y587 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
AP4S1Q9Y587 RPL23AP15-201ENST00000450202 459 ntBASIC2.17□□□□□ -2.06
AP4S1Q9Y587 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.17□□□□□ -2.06
AP4S1Q9Y587 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
AP4S1Q9Y587 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.17□□□□□ -2.06
AP4S1Q9Y587 AC026436.1-201ENST00000510537 270 ntBASIC2.17□□□□□ -2.06
AP4S1Q9Y587 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.17□□□□□ -2.06
AP4S1Q9Y587 AC087808.1-201ENST00000520501 361 ntBASIC2.17□□□□□ -2.06
AP4S1Q9Y587 AC025755.1-201ENST00000521306 278 ntBASIC2.17□□□□□ -2.06
AP4S1Q9Y587 OR6C73P-201ENST00000546432 358 ntBASIC2.17□□□□□ -2.06
AP4S1Q9Y587 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
AP4S1Q9Y587 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.17□□□□□ -2.06
AP4S1Q9Y587 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.17□□□□□ -2.06
AP4S1Q9Y587 AC112503.2-201ENST00000609005 552 ntBASIC2.17□□□□□ -2.06
AP4S1Q9Y587 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.17□□□□□ -2.06
AP4S1Q9Y587 AP000553.5-201ENST00000641933 54 ntBASIC2.17□□□□□ -2.06
AP4S1Q9Y587 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
AP4S1Q9Y587 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.16□□□□□ -2.06
AP4S1Q9Y587 OR56A5-201ENST00000340110 738 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 RNU6-859P-201ENST00000362728 107 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 MIR134-201ENST00000385258 73 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 AL139039.1-201ENST00000401900 692 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 AL359511.1-201ENST00000402970 211 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 AL591416.1-201ENST00000404015 867 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.16□□□□□ -2.06
AP4S1Q9Y587 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.16□□□□□ -2.06
AP4S1Q9Y587 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.16□□□□□ -2.06
AP4S1Q9Y587 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.16□□□□□ -2.06
AP4S1Q9Y587 AC244098.2-201ENST00000422068 99 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 FCF1P1-201ENST00000432690 571 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 LSM1P1-201ENST00000438629 273 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 ARL5AP2-201ENST00000444698 533 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.16□□□□□ -2.06
AP4S1Q9Y587 BX510359.1-201ENST00000456973 237 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 AC017015.1-201ENST00000477387 286 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 AC004263.1-201ENST00000479327 332 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.16□□□□□ -2.06
AP4S1Q9Y587 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
AP4S1Q9Y587 AC093755.1-201ENST00000512950 1023 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 RNA5SP320-201ENST00000516263 124 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 SUB1P1-201ENST00000524415 382 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 MTCYBP41-201ENST00000528913 1123 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.16□□□□□ -2.06
AP4S1Q9Y587 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.16□□□□□ -2.06
AP4S1Q9Y587 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.16□□□□□ -2.06
AP4S1Q9Y587 AL159169.3-201ENST00000608871 561 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.16□□□□□ -2.06
AP4S1Q9Y587 AC013562.2-201ENST00000611632 603 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 AC012314.7-201ENST00000619693 93 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 MIR6810-201ENST00000622701 70 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.16□□□□□ -2.06
AP4S1Q9Y587 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
AP4S1Q9Y587 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.16□□□□□ -2.06
AP4S1Q9Y587 AL122126.1-201ENST00000546905 1318 ntBASIC2.16□□□□□ -2.06
AP4S1Q9Y587 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
AP4S1Q9Y587 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
AP4S1Q9Y587 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.15□□□□□ -2.07
AP4S1Q9Y587 MIR7-3-201ENST00000384898 110 ntBASIC2.15□□□□□ -2.07
AP4S1Q9Y587 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
AP4S1Q9Y587 MTATP6P11-201ENST00000428071 670 ntBASIC2.15□□□□□ -2.07
AP4S1Q9Y587 SRIP2-201ENST00000428470 166 ntBASIC2.15□□□□□ -2.07
AP4S1Q9Y587 RPS15AP28-201ENST00000435088 386 ntBASIC2.15□□□□□ -2.07
AP4S1Q9Y587 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.15□□□□□ -2.07
AP4S1Q9Y587 AP000936.2-201ENST00000447151 681 ntBASIC2.15□□□□□ -2.07
AP4S1Q9Y587 CALM1P2-201ENST00000452941 448 ntBASIC2.15□□□□□ -2.07
AP4S1Q9Y587 AC006445.2-201ENST00000510061 472 ntBASIC2.15□□□□□ -2.07
AP4S1Q9Y587 AC034159.1-201ENST00000513885 583 ntBASIC2.15□□□□□ -2.07
AP4S1Q9Y587 RN7SKP40-201ENST00000517211 242 ntBASIC2.15□□□□□ -2.07
AP4S1Q9Y587 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.15□□□□□ -2.07
AP4S1Q9Y587 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.15□□□□□ -2.07
AP4S1Q9Y587 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.15□□□□□ -2.07
AP4S1Q9Y587 SNORD53-201ENST00000579969 78 ntBASIC2.15□□□□□ -2.07
AP4S1Q9Y587 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.15□□□□□ -2.07
AP4S1Q9Y587 AC079880.2-201ENST00000603790 1213 ntBASIC2.15□□□□□ -2.07
AP4S1Q9Y587 AC093732.2-201ENST00000607950 274 ntBASIC2.15□□□□□ -2.07
AP4S1Q9Y587 MIR6766-201ENST00000622641 72 ntBASIC2.15□□□□□ -2.07
AP4S1Q9Y587 AC034229.5-201ENST00000624258 185 ntBASIC2.15□□□□□ -2.07
AP4S1Q9Y587 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.15□□□□□ -2.07
AP4S1Q9Y587 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.15□□□□□ -2.07
AP4S1Q9Y587 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.15□□□□□ -2.07
AP4S1Q9Y587 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
AP4S1Q9Y587 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.14□□□□□ -2.07
AP4S1Q9Y587 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
AP4S1Q9Y587 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
AP4S1Q9Y587 HSPE1P11-201ENST00000339579 310 ntBASIC2.14□□□□□ -2.07
AP4S1Q9Y587 SNORA14A-201ENST00000364773 135 ntBASIC2.14□□□□□ -2.07
AP4S1Q9Y587 AL138880.1-201ENST00000405824 642 ntBASIC2.14□□□□□ -2.07
AP4S1Q9Y587 Y_RNA.625-201ENST00000411256 107 ntBASIC2.14□□□□□ -2.07
AP4S1Q9Y587 AJ239321.1-201ENST00000424255 564 ntBASIC2.14□□□□□ -2.07
AP4S1Q9Y587 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms