Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MIR7-2-201ENST00000384970 110 ntBASIC3.51□□□□□ -1.85
SHANK2Q9UPX8 AC234781.4-201ENST00000419384 244 ntBASIC3.51□□□□□ -1.85
SHANK2Q9UPX8 RPL7P53-201ENST00000421245 739 ntBASIC3.51□□□□□ -1.85
SHANK2Q9UPX8 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.51□□□□□ -1.85
SHANK2Q9UPX8 AC107222.1-201ENST00000510899 637 ntBASIC3.51□□□□□ -1.85
SHANK2Q9UPX8 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.51□□□□□ -1.85
SHANK2Q9UPX8 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.51□□□□□ -1.85
SHANK2Q9UPX8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SHANK2Q9UPX8 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SHANK2Q9UPX8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SHANK2Q9UPX8 AL356292.1-201ENST00000283110 373 ntBASIC3.5□□□□□ -1.85
SHANK2Q9UPX8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SHANK2Q9UPX8 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHANK2Q9UPX8 SNORA79B-201ENST00000410557 148 ntBASIC3.5□□□□□ -1.85
SHANK2Q9UPX8 AC013410.1-201ENST00000436223 1232 ntBASIC3.5□□□□□ -1.85
SHANK2Q9UPX8 GSTA11P-201ENST00000452866 669 ntBASIC3.5□□□□□ -1.85
SHANK2Q9UPX8 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SHANK2Q9UPX8 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.5□□□□□ -1.85
SHANK2Q9UPX8 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SHANK2Q9UPX8 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.5□□□□□ -1.85
SHANK2Q9UPX8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHANK2Q9UPX8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SHANK2Q9UPX8 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHANK2Q9UPX8 CEACAMP4-201ENST00000457676 421 ntBASIC3.49□□□□□ -1.85
SHANK2Q9UPX8 AL024509.2-201ENST00000493462 493 ntBASIC3.49□□□□□ -1.85
SHANK2Q9UPX8 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.49□□□□□ -1.85
SHANK2Q9UPX8 AC090819.1-201ENST00000523800 1111 ntBASIC3.49□□□□□ -1.85
SHANK2Q9UPX8 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.49□□□□□ -1.85
SHANK2Q9UPX8 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.49□□□□□ -1.85
SHANK2Q9UPX8 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHANK2Q9UPX8 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.49□□□□□ -1.85
SHANK2Q9UPX8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHANK2Q9UPX8 CUL1P1-201ENST00000509510 2425 ntBASIC3.49□□□□□ -1.85
SHANK2Q9UPX8 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SHANK2Q9UPX8 MIR365B-201ENST00000362317 111 ntBASIC3.48□□□□□ -1.85
SHANK2Q9UPX8 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHANK2Q9UPX8 GSTA9P-201ENST00000406231 611 ntBASIC3.48□□□□□ -1.85
SHANK2Q9UPX8 ATG3P1-201ENST00000419507 911 ntBASIC3.48□□□□□ -1.85
SHANK2Q9UPX8 AC013470.3-201ENST00000420252 1194 ntBASIC3.48□□□□□ -1.85
SHANK2Q9UPX8 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHANK2Q9UPX8 GAPDHP27-201ENST00000447427 1020 ntBASIC3.48□□□□□ -1.85
SHANK2Q9UPX8 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.48□□□□□ -1.85
SHANK2Q9UPX8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
SHANK2Q9UPX8 AC026464.5-201ENST00000562497 722 ntBASIC3.48□□□□□ -1.85
SHANK2Q9UPX8 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.48□□□□□ -1.85
SHANK2Q9UPX8 MIR6766-201ENST00000622641 72 ntBASIC3.48□□□□□ -1.85
SHANK2Q9UPX8 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.48□□□□□ -1.85
SHANK2Q9UPX8 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.48□□□□□ -1.85
SHANK2Q9UPX8 RNA5SP239-201ENST00000410218 129 ntBASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 NDUFS5P3-201ENST00000450668 321 ntBASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 AC023043.2-201ENST00000589678 1026 ntBASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 AC099778.2-201ENST00000610904 211 ntBASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 AC002076.2-201ENST00000617362 122 ntBASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 AL162233.1-201ENST00000620014 944 ntBASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 AC093775.1-201ENST00000624154 1868 ntBASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 AC011460.1-201ENST00000636268 1834 ntBASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 SNORA80E-201ENST00000384744 137 ntBASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 AC117522.2-201ENST00000510049 657 ntBASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 AP003467.2-201ENST00000520175 319 ntBASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 OR5BN1P-201ENST00000532955 829 ntBASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 LRRC77P-213ENST00000637727 880 ntBASIC3.47□□□□□ -1.85
SHANK2Q9UPX8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
SHANK2Q9UPX8 DYNLT3P1-201ENST00000378574 347 ntBASIC3.46□□□□□ -1.86
SHANK2Q9UPX8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
SHANK2Q9UPX8 RPL31P45-201ENST00000419532 356 ntBASIC3.46□□□□□ -1.86
SHANK2Q9UPX8 MTCYBP14-201ENST00000457471 715 ntBASIC3.46□□□□□ -1.86
SHANK2Q9UPX8 RNA5SP385-201ENST00000515947 110 ntBASIC3.46□□□□□ -1.86
SHANK2Q9UPX8 HMGB1P41-201ENST00000520234 440 ntBASIC3.46□□□□□ -1.86
SHANK2Q9UPX8 ELOCP31-201ENST00000540463 467 ntBASIC3.46□□□□□ -1.86
SHANK2Q9UPX8 AC008126.1-201ENST00000549019 480 ntBASIC3.46□□□□□ -1.86
SHANK2Q9UPX8 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.46□□□□□ -1.86
SHANK2Q9UPX8 AC090695.1-201ENST00000561269 1222 ntBASIC3.46□□□□□ -1.86
SHANK2Q9UPX8 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHANK2Q9UPX8 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 RANP7-201ENST00000418085 644 ntBASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 RPL23AP49-201ENST00000492925 468 ntBASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 XKRY-201ENST00000510392 1100 ntBASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 RN7SKP82-201ENST00000516786 223 ntBASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 HSPE1P18-201ENST00000517602 280 ntBASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 SNRPGP18-201ENST00000553000 214 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms