Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ALDH7A1P3-201ENST00000492517 345 ntBASIC2.25□□□□□ -2.05
CHD7Q9P2D1 RPL21P16-201ENST00000495531 483 ntBASIC2.25□□□□□ -2.05
CHD7Q9P2D1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
CHD7Q9P2D1 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.25□□□□□ -2.05
CHD7Q9P2D1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CHD7Q9P2D1 RPS3AP4-201ENST00000555161 764 ntBASIC2.25□□□□□ -2.05
CHD7Q9P2D1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.25□□□□□ -2.05
CHD7Q9P2D1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.25□□□□□ -2.05
CHD7Q9P2D1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CHD7Q9P2D1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
CHD7Q9P2D1 AC004925.1-201ENST00000624256 2706 ntBASIC2.25□□□□□ -2.05
CHD7Q9P2D1 MTCO1P22-201ENST00000604619 1360 ntBASIC2.25□□□□□ -2.05
CHD7Q9P2D1 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CHD7Q9P2D1 AC002543.1-201ENST00000299783 1954 ntBASIC2.25□□□□□ -2.05
CHD7Q9P2D1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CHD7Q9P2D1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC2.25□□□□□ -2.05
CHD7Q9P2D1 AC055876.1-202ENST00000567053 138 ntBASIC2.25□□□□□ -2.05
CHD7Q9P2D1 AP004372.1-201ENST00000604842 844 ntBASIC2.25□□□□□ -2.05
CHD7Q9P2D1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CHD7Q9P2D1 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
CHD7Q9P2D1 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.25□□□□□ -2.05
CHD7Q9P2D1 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CHD7Q9P2D1 AC107871.2-201ENST00000612894 502 ntBASIC2.25□□□□□ -2.05
CHD7Q9P2D1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.24□□□□□ -2.05
CHD7Q9P2D1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.24□□□□□ -2.05
CHD7Q9P2D1 AC090229.1-201ENST00000590983 1609 ntBASIC2.24□□□□□ -2.05
CHD7Q9P2D1 Y_RNA.122-201ENST00000363331 96 ntBASIC2.24□□□□□ -2.05
CHD7Q9P2D1 MIR9-3-201ENST00000385084 90 ntBASIC2.24□□□□□ -2.05
CHD7Q9P2D1 AL356806.1-201ENST00000422524 916 ntBASIC2.24□□□□□ -2.05
CHD7Q9P2D1 RPS24P8-201ENST00000431490 402 ntBASIC2.24□□□□□ -2.05
CHD7Q9P2D1 AC068305.1-201ENST00000497406 726 ntBASIC2.24□□□□□ -2.05
CHD7Q9P2D1 AC005840.1-201ENST00000498412 377 ntBASIC2.24□□□□□ -2.05
CHD7Q9P2D1 CU459211.1-201ENST00000635667 749 ntBASIC2.24□□□□□ -2.05
CHD7Q9P2D1 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CHD7Q9P2D1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.24□□□□□ -2.05
CHD7Q9P2D1 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CHD7Q9P2D1 AC007182.2-201ENST00000489251 402 ntBASIC2.24□□□□□ -2.05
CHD7Q9P2D1 RNA5SP380-201ENST00000517190 98 ntBASIC2.24□□□□□ -2.05
CHD7Q9P2D1 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC2.24□□□□□ -2.05
CHD7Q9P2D1 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.24□□□□□ -2.05
CHD7Q9P2D1 AC078899.5-201ENST00000612475 178 ntBASIC2.24□□□□□ -2.05
CHD7Q9P2D1 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.24□□□□□ -2.05
CHD7Q9P2D1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CHD7Q9P2D1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CHD7Q9P2D1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CHD7Q9P2D1 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CHD7Q9P2D1 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CHD7Q9P2D1 AL139276.1-201ENST00000311910 1001 ntBASIC2.23□□□□□ -2.05
CHD7Q9P2D1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.23□□□□□ -2.05
CHD7Q9P2D1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.23□□□□□ -2.05
CHD7Q9P2D1 RNA5SP76-201ENST00000516277 87 ntBASIC2.23□□□□□ -2.05
CHD7Q9P2D1 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.23□□□□□ -2.05
CHD7Q9P2D1 AC025281.1-201ENST00000567026 265 ntBASIC2.23□□□□□ -2.05
CHD7Q9P2D1 AL589994.2-201ENST00000621124 579 ntBASIC2.23□□□□□ -2.05
CHD7Q9P2D1 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC2.23□□□□□ -2.05
CHD7Q9P2D1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CHD7Q9P2D1 AC026523.2-201ENST00000625039 7739 ntBASIC2.23□□□□□ -2.05
CHD7Q9P2D1 RPL23AP48-201ENST00000406913 488 ntBASIC2.23□□□□□ -2.05
CHD7Q9P2D1 RPL23AP16-201ENST00000441715 421 ntBASIC2.23□□□□□ -2.05
CHD7Q9P2D1 AC002553.2-201ENST00000453217 340 ntBASIC2.23□□□□□ -2.05
CHD7Q9P2D1 AC055855.1-201ENST00000489563 579 ntBASIC2.23□□□□□ -2.05
CHD7Q9P2D1 RNU6-1231P-201ENST00000517185 103 ntBASIC2.23□□□□□ -2.05
CHD7Q9P2D1 MIR4303-201ENST00000581299 66 ntBASIC2.23□□□□□ -2.05
CHD7Q9P2D1 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CHD7Q9P2D1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
CHD7Q9P2D1 OR5H15-201ENST00000383696 930 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 MIR1276-201ENST00000408707 83 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 RNU4-62P-201ENST00000410125 130 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 AC017078.1-201ENST00000416146 368 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 TRMT112P2-201ENST00000512910 132 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 AF186190.1-201ENST00000517470 480 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 AP003467.2-201ENST00000520175 319 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 OR4R2P-201ENST00000530815 597 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 OR4T1P-201ENST00000554933 911 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 AC091953.2-201ENST00000623979 160 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
CHD7Q9P2D1 AL138878.1-201ENST00000405131 347 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 AC106872.2-201ENST00000494303 480 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 OR52A4P-203ENST00000498233 1014 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 AP005136.1-201ENST00000579765 429 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CHD7Q9P2D1 ADAM3A-203ENST00000461344 2157 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.22□□□□□ -2.05
CHD7Q9P2D1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CHD7Q9P2D1 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CHD7Q9P2D1 AC011753.1-201ENST00000451001 220 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 AC017007.3-201ENST00000479865 435 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.22□□□□□ -2.05
CHD7Q9P2D1 MIR4255-201ENST00000579351 72 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 MIR5002-201ENST00000584713 97 ntBASIC2.22□□□□□ -2.05
CHD7Q9P2D1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.22□□□□□ -2.05
CHD7Q9P2D1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CHD7Q9P2D1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CHD7Q9P2D1 RNA5SP190-201ENST00000365222 118 ntBASIC2.21□□□□□ -2.06
CHD7Q9P2D1 RNU2-17P-201ENST00000410290 190 ntBASIC2.21□□□□□ -2.06
CHD7Q9P2D1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.21□□□□□ -2.06
CHD7Q9P2D1 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CHD7Q9P2D1 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC2.21□□□□□ -2.06
CHD7Q9P2D1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms