Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.15□□□□□ -1.74
LRFN1Q9P244 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
LRFN1Q9P244 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
LRFN1Q9P244 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LRFN1Q9P244 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LRFN1Q9P244 Y_RNA.51-201ENST00000362725 102 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.15□□□□□ -1.75
LRFN1Q9P244 LAP3P1-201ENST00000403648 294 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 RNU2-43P-201ENST00000410306 190 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.15□□□□□ -1.75
LRFN1Q9P244 TMSB10P2-201ENST00000416049 131 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.15□□□□□ -1.75
LRFN1Q9P244 AL356583.2-201ENST00000426536 280 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.15□□□□□ -1.75
LRFN1Q9P244 AL138799.3-201ENST00000438968 350 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 CBX1P1-201ENST00000440184 427 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 AC114495.1-201ENST00000441274 436 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 ST13P20-201ENST00000447996 1065 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 USP9YP12-201ENST00000450481 570 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LRFN1Q9P244 AC007967.1-201ENST00000455422 1159 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 AC010618.1-201ENST00000469924 477 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 RPL23AP41-201ENST00000484754 458 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 RN7SL810P-201ENST00000493031 276 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 BNIP3P41-201ENST00000503774 571 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 AC093824.1-201ENST00000508796 343 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.15□□□□□ -1.75
LRFN1Q9P244 AC022483.1-201ENST00000514020 567 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.15□□□□□ -1.75
LRFN1Q9P244 RNU6-1073P-201ENST00000517182 106 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 AP002748.2-201ENST00000528671 348 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 OR5D17P-201ENST00000531492 978 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.15□□□□□ -1.75
LRFN1Q9P244 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LRFN1Q9P244 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LRFN1Q9P244 AC135001.1-201ENST00000544546 283 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.15□□□□□ -1.75
LRFN1Q9P244 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.15□□□□□ -1.75
LRFN1Q9P244 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.15□□□□□ -1.75
LRFN1Q9P244 AL109766.1-201ENST00000555080 552 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 ZNF519P3-201ENST00000557158 1032 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 RNF138P2-201ENST00000603490 592 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 AL109618.2-201ENST00000605527 211 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 AC092140.2-201ENST00000618027 521 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 AC011944.2-201ENST00000624440 683 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 AC006065.6-201ENST00000625201 545 ntBASIC4.15□□□□□ -1.75
LRFN1Q9P244 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LRFN1Q9P244 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
LRFN1Q9P244 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.15□□□□□ -1.75
LRFN1Q9P244 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LRFN1Q9P244 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LRFN1Q9P244 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.15□□□□□ -1.75
LRFN1Q9P244 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRFN1Q9P244 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 RNA5SP28-201ENST00000363841 119 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC078974.1-201ENST00000411597 223 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 SSXP9-201ENST00000417503 292 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC233728.2-201ENST00000425348 757 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 MTCO1P39-201ENST00000426148 480 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC079780.1-201ENST00000428259 207 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC010153.1-201ENST00000432862 727 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 AL049734.2-201ENST00000441066 616 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 AL359073.1-201ENST00000448036 403 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC234775.1-201ENST00000454247 670 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC020890.1-201ENST00000491837 504 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC010424.1-201ENST00000506336 297 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 SLC25A15P5-201ENST00000508033 253 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 KLHL2P1-201ENST00000508691 521 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC022878.1-201ENST00000530684 149 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 MIR3939-201ENST00000582614 106 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC112191.3-201ENST00000604371 277 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC064872.1-201ENST00000604823 1072 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 RN7SKP299-201ENST00000606679 301 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 OR10AB1P-201ENST00000609613 938 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 MIR6716-201ENST00000613413 80 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC011939.3-201ENST00000613686 466 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.14□□□□□ -1.75
LRFN1Q9P244 AL713922.2-201ENST00000619384 716 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 AL590240.3-201ENST00000621416 943 ntBASIC4.14□□□□□ -1.75
LRFN1Q9P244 AC009878.1-201ENST00000621819 340 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms