Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 PAICSP4-201ENST00000517543 1253 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 MIR5186-201ENST00000577504 120 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 COX6CP3-201ENST00000580869 223 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 BDH2P1-201ENST00000602288 736 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 AC084035.1-201ENST00000634543 607 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 MTCO1P4-201ENST00000520516 1409 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AC093010.3-201ENST00000570269 15214 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 RNA5SP515-201ENST00000364570 118 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 RNU6ATAC-201ENST00000408749 126 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AC079780.1-201ENST00000428259 207 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AL390023.1-201ENST00000428836 262 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 MOB1AP2-201ENST00000446060 614 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AC096751.1-202ENST00000502691 1067 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 MLLT10P2-201ENST00000506434 249 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 RNU6-885P-201ENST00000516607 104 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 RNA5SP135-201ENST00000517019 125 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 OR4P1P-201ENST00000530808 1136 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 SNRPGP16-201ENST00000533275 226 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AC093519.1-201ENST00000566109 298 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 MIR2682-201ENST00000580305 110 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AP001330.4-201ENST00000604350 154 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AC124312.4-201ENST00000605533 310 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AC004832.5-201ENST00000608677 401 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AL355810.1-201ENST00000614629 552 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AL034408.1-202ENST00000636088 415 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 AL392088.2-201ENST00000637607 285 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 ZNF663P-202ENST00000641770 1131 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 BX649567.1-201ENST00000642071 1134 ntBASIC2.81□□□□□ -1.96
CLN6Q9NWW5 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.81□□□□□ -1.96
CLN6Q9NWW5 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 ZNF807-201ENST00000328088 1707 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 NUP58P1-201ENST00000502546 1738 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 SGO1P2-201ENST00000429458 1589 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AL049780.3-201ENST00000624612 1583 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 RNU6-582P-201ENST00000362989 107 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 RNU6-549P-201ENST00000384433 107 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 SNORD116-23-201ENST00000384645 92 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 RPS3AP26-201ENST00000398259 784 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AL024474.1-201ENST00000404655 591 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 RNU6-1077P-201ENST00000410506 102 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AC016769.2-201ENST00000414815 475 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 FCF1P2-201ENST00000415284 583 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 HSFY4P-201ENST00000415994 1181 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 RPL21P32-201ENST00000419877 477 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 SFR1P2-201ENST00000421841 730 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AC233728.2-201ENST00000425348 757 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AC005345.1-201ENST00000431868 217 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AL353705.1-201ENST00000433468 480 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AC007389.2-201ENST00000434630 306 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 SNRPEP4-201ENST00000435815 279 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AL158053.1-201ENST00000441503 453 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 MTND2P19-201ENST00000449129 1012 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms