Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 AC012182.1-201ENST00000570133 895 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 ROCK1P1-201ENST00000573767 549 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 AC013444.2-201ENST00000603317 787 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 AP000403.1-201ENST00000603349 851 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 Z99497.2-201ENST00000603634 310 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 AC121247.2-201ENST00000604776 136 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 FAM25E-202ENST00000608562 189 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 AC128687.2-201ENST00000609657 566 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 MIR486-1-201ENST00000612171 68 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 RN7SL722P-201ENST00000617780 284 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 uc_338.13-201ENST00000618243 179 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 RN7SL565P-201ENST00000618246 284 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 AC007546.1-201ENST00000619452 559 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 U7.8-201ENST00000619968 63 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 MIR3974-201ENST00000637126 96 ntBASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CHMP1AQ9HD42 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AL445523.1-201ENST00000451184 1362 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 FRG1BP-201ENST00000278882 761 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 OR5P1P-201ENST00000299512 925 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 OR11H4-201ENST00000315409 1082 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 MIR331-201ENST00000362302 94 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 RNU6-853P-201ENST00000364306 107 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 SNORA70F-201ENST00000384142 135 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 RNA5SP87-201ENST00000384155 118 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 SNORD3H-201ENST00000384486 214 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 CYB5AP4-201ENST00000396692 399 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC119751.6-201ENST00000416712 186 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 SSXP9-201ENST00000417503 292 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 RPL23AP46-201ENST00000438548 490 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AL512286.1-201ENST00000439244 400 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 UBE2D3P4-201ENST00000441973 436 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AL359073.1-201ENST00000448036 403 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 RPS27AP8-201ENST00000452665 445 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 MTND2P28-201ENST00000457540 1044 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC021382.1-201ENST00000483523 359 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC110792.1-201ENST00000491826 472 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC118465.1-201ENST00000513820 1271 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 MTCO1P49-201ENST00000523429 802 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 RPL23AP87-202ENST00000573039 466 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 RN7SL753P-201ENST00000581238 290 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 RN7SL690P-201ENST00000582087 240 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 UBE2L4-201ENST00000587688 464 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC022146.1-201ENST00000595307 847 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AL354984.3-201ENST00000604803 325 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC113403.1-201ENST00000604910 193 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AL161616.1-201ENST00000611867 286 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AL158801.5-201ENST00000623123 465 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC091953.3-201ENST00000623220 236 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC140479.6-201ENST00000633535 357 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 AC006378.2-201ENST00000623178 2476 ntBASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
CHMP1AQ9HD42 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms