Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AC084824.1-201ENST00000550917 1005 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 LSM6P2-201ENST00000552208 177 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 MTCYBP22-201ENST00000603788 447 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AC024560.3-201ENST00000608482 349 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 AL356596.1-201ENST00000624230 379 ntBASIC3.92□□□□□ -1.78
PCDH9Q9HC56 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDH9Q9HC56 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 RPL21P132-201ENST00000331267 462 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 Y_RNA.302-201ENST00000364997 102 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 AC069218.2-201ENST00000411665 344 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 TPMTP3-201ENST00000411928 735 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 USP9YP7-201ENST00000436723 430 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 MTND1P30-201ENST00000441241 901 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 AL360221.1-201ENST00000445989 335 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 RPL39P6-201ENST00000448289 150 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 USP9YP32-201ENST00000452432 430 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 NANOGP10-201ENST00000453325 895 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 KATNBL1P6-201ENST00000453433 915 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 OR9M1P-201ENST00000459641 921 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 AC108941.1-201ENST00000502853 530 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 KLRA1P-201ENST00000503499 986 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 SNX5P1-201ENST00000505757 1041 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 MTCYBP37-201ENST00000510642 1133 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 SNORA70.14-201ENST00000516205 110 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 RNU6-150P-201ENST00000516237 95 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 RPL12P22-201ENST00000519073 490 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 AL389895.1-201ENST00000554127 252 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 SULT1C2P1-202ENST00000562418 459 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 VN1R92P-201ENST00000598511 928 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 AC146944.4-201ENST00000602697 718 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 U73023.1-201ENST00000603134 700 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 AP001981.2-201ENST00000603241 418 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 AC004987.4-201ENST00000603383 338 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 BNIP3P11-201ENST00000603878 563 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 AL391497.1-201ENST00000608671 547 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 AC011939.3-201ENST00000613686 466 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 MIR6864-201ENST00000617935 70 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 AC127502.3-201ENST00000636170 1206 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 AC099063.3-201ENST00000642066 185 ntBASIC3.91□□□□□ -1.78
PCDH9Q9HC56 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDH9Q9HC56 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 RNU6-500P-201ENST00000362349 107 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 RNA5SP479-201ENST00000364858 117 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 RNA5SP88-201ENST00000365560 109 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AC007066.1-201ENST00000392902 381 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 RPS3AP26-201ENST00000398259 784 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AL023807.1-201ENST00000407932 359 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AC010153.1-201ENST00000432862 727 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 SNORA71B-202ENST00000439232 272 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 MTCO2P7-201ENST00000446518 666 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 RPL36AP33-201ENST00000450395 310 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 TRGVB-201ENST00000453257 471 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 SETP11-201ENST00000473027 690 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AP000893.1-201ENST00000474462 794 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AL024509.2-201ENST00000493462 493 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AC005726.1-201ENST00000494679 427 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AC091435.1-201ENST00000505442 584 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AC091965.2-201ENST00000512324 613 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AC106038.2-201ENST00000520706 568 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AC008489.1-201ENST00000524271 483 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 DEFB131D-201ENST00000526803 184 ntBASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCDH9Q9HC56 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms