Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 ATP5F1P3-201ENST00000397213 657 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 RNA5SP80-201ENST00000410475 111 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC004987.3-201ENST00000413879 771 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AL365338.1-201ENST00000422282 858 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 Z93242.1-201ENST00000427102 353 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 VN1R108P-201ENST00000431580 830 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 RAB11AP1-201ENST00000442978 646 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC093278.1-201ENST00000494700 600 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC105313.1-201ENST00000509121 353 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 HSPE1P23-201ENST00000509838 286 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 SNORA3.4-201ENST00000515969 96 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 TRAV37-201ENST00000553906 342 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 MTCYBP27-201ENST00000555160 670 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 DUXAP1-201ENST00000556632 463 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC135628.1-201ENST00000568867 534 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC022916.3-201ENST00000592961 742 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AL022161.1-201ENST00000604390 213 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AL133507.1-201ENST00000605269 557 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC010680.4-201ENST00000605334 543 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC068831.8-201ENST00000620171 435 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AL512506.2-201ENST00000624472 458 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 AC103706.2-201ENST00000638080 240 ntBASIC4.03□□□□□ -1.76
UPF2Q9HAU5 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UPF2Q9HAU5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AC119744.1-201ENST00000454746 1715 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AC025125.1-201ENST00000624743 1922 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 U3.6-201ENST00000363622 211 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 RNU6-560P-201ENST00000364007 108 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 RN7SKP227-201ENST00000364445 330 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 Y_RNA.465-201ENST00000384293 102 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AC007435.1-201ENST00000421086 415 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AC073387.1-201ENST00000453261 709 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AC078785.3-201ENST00000476607 425 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AC092185.1-201ENST00000491371 97 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AP001086.1-201ENST00000494882 321 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AC010198.2-201ENST00000550612 259 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AP001180.3-201ENST00000582221 145 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AC021749.1-201ENST00000604322 607 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AC078883.4-201ENST00000623218 367 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AC007490.1-201ENST00000624321 703 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AC068724.3-201ENST00000625906 87 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 AP000776.1-201ENST00000530032 1663 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.02□□□□□ -1.77
UPF2Q9HAU5 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms