Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC074029.4-201ENST00000624796 1859 ntBASIC4.83□□□□□ -1.64
VPS11Q9H270 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS11Q9H270 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VPS11Q9H270 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
VPS11Q9H270 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS11Q9H270 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS11Q9H270 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VPS11Q9H270 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS11Q9H270 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS11Q9H270 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS11Q9H270 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS11Q9H270 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS11Q9H270 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS11Q9H270 SNURFL-201ENST00000309296 343 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS11Q9H270 Y_RNA.431-201ENST00000384086 102 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 RNA5SP146-201ENST00000410743 123 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 AC009310.1-201ENST00000414414 451 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS11Q9H270 NCOR1P3-201ENST00000420479 303 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 AL592293.2-201ENST00000422292 996 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS11Q9H270 AC018630.2-202ENST00000422992 927 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS11Q9H270 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS11Q9H270 AC009961.2-201ENST00000435771 251 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 CALM1P1-201ENST00000442082 433 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 BRK1P2-201ENST00000442875 223 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 MRPL50P4-201ENST00000446432 475 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 RPS18P6-201ENST00000476880 458 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 AC093278.1-201ENST00000494700 600 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 AC108078.3-201ENST00000502633 489 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 AC021146.2-201ENST00000504736 556 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 AC139783.2-201ENST00000504847 1145 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS11Q9H270 IGKV2-18-201ENST00000522607 343 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 AC239860.2-201ENST00000525886 270 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS11Q9H270 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS11Q9H270 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS11Q9H270 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS11Q9H270 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VPS11Q9H270 AL049839.1-201ENST00000556151 657 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS11Q9H270 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS11Q9H270 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS11Q9H270 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS11Q9H270 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS11Q9H270 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.82□□□□□ -1.64
VPS11Q9H270 BNIP3P23-201ENST00000599655 511 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 AC006006.1-201ENST00000603082 144 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 AC136443.5-201ENST00000603741 370 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 IMMP1LP3-201ENST00000604197 224 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 AC112191.3-201ENST00000604371 277 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 AL627230.1-201ENST00000613077 211 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 AL591926.8-201ENST00000616876 211 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS11Q9H270 AC093591.3-201ENST00000634516 308 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
VPS11Q9H270 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
VPS11Q9H270 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
VPS11Q9H270 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS11Q9H270 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
VPS11Q9H270 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS11Q9H270 PABPC1P7-201ENST00000413177 1513 ntBASIC4.82□□□□□ -1.64
VPS11Q9H270 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS11Q9H270 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VPS11Q9H270 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS11Q9H270 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
VPS11Q9H270 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS11Q9H270 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS11Q9H270 MTND5P16-201ENST00000460269 1703 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS11Q9H270 RNU6-451P-201ENST00000362921 107 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 RNU6-723P-201ENST00000383973 107 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 MIR153-1-201ENST00000384914 90 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 U3.25-201ENST00000391209 220 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 AL122016.1-201ENST00000403365 367 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 AL080315.1-201ENST00000406055 466 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 MIR548P-201ENST00000408336 84 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS11Q9H270 SNRPEP10-201ENST00000420249 274 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS11Q9H270 AC073335.1-201ENST00000427776 363 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 BX890604.2-201ENST00000427883 474 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS11Q9H270 AL451139.1-201ENST00000434718 346 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.81□□□□□ -1.64
VPS11Q9H270 TPT1P13-201ENST00000449760 499 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 Z82190.1-201ENST00000454534 490 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 MTCO3P20-201ENST00000454926 688 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS11Q9H270 RNU6-420P-201ENST00000458780 107 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 RPS15AP17-201ENST00000470598 390 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 AL136126.1-201ENST00000473603 402 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 RPL23AP65-201ENST00000475608 468 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 RN7SL319P-201ENST00000480656 221 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 RN7SL97P-201ENST00000486780 299 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 RN7SL214P-201ENST00000487317 265 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms