Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 MTND5P42-201ENST00000637720 498 ntBASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXP3Q9BZS1 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 AC005332.5-201ENST00000591222 2919 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 AC104118.1-201ENST00000607625 1589 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 RNU6-28P-201ENST00000362378 107 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 RN7SKP115-201ENST00000363177 317 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 RN7SKP103-201ENST00000363848 320 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 RNU6-996P-201ENST00000365438 107 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 Y_RNA.387-201ENST00000383918 102 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 SNORA2.3-201ENST00000383920 135 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 AL024474.1-201ENST00000404655 591 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 RPL37P18-201ENST00000411602 243 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 RPS15AP12-201ENST00000419498 388 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 BRK1P2-201ENST00000442875 223 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 Z80107.2-201ENST00000445127 392 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 AC073850.1-201ENST00000449243 255 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 SNORD19B-201ENST00000459623 84 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 RPL7P42-201ENST00000481005 679 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 NDUFB5P1-201ENST00000508134 564 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 RN7SKP66-201ENST00000516681 231 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 AP000907.2-201ENST00000530827 353 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 BNIP3P6-201ENST00000549284 499 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 MIR3146-201ENST00000580367 79 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 AL121655.1-201ENST00000605811 308 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 AC093838.1-201ENST00000613014 469 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 AC100827.5-201ENST00000615883 426 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 AC097714.1-201ENST00000511272 1647 ntBASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
FOXP3Q9BZS1 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
FOXP3Q9BZS1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
FOXP3Q9BZS1 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
FOXP3Q9BZS1 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.21□□□□□ -1.57
FOXP3Q9BZS1 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.21□□□□□ -1.57
FOXP3Q9BZS1 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 OR55B1P-203ENST00000641518 2602 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 RNA5SP305-201ENST00000362665 119 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 MIR548P-201ENST00000408336 84 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 U3.36-201ENST00000408418 213 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 AC093162.1-201ENST00000419682 124 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 MTCYBP8-201ENST00000422855 651 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 AC092832.1-201ENST00000422934 400 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 DUTP6-201ENST00000425573 462 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 AC137499.1-201ENST00000427602 88 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 MRPL48P1-201ENST00000445390 636 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 AK3P4-201ENST00000504283 583 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 RNU4-49P-201ENST00000516080 140 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 RNU6-347P-201ENST00000516658 105 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 OR5BN1P-201ENST00000532955 829 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 AC053481.3-201ENST00000577881 843 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 RNF138P2-201ENST00000603490 592 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 RPL23AP92-201ENST00000603609 255 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms