Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSBP4Q9BWG4 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.84□□□□□ -1.63
SSBP4Q9BWG4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
SSBP4Q9BWG4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SSBP4Q9BWG4 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
SSBP4Q9BWG4 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC4.84□□□□□ -1.64
SSBP4Q9BWG4 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SSBP4Q9BWG4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
SSBP4Q9BWG4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.84□□□□□ -1.64
SSBP4Q9BWG4 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SSBP4Q9BWG4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 BTK-209ENST00000618050 2417 ntTSL 5 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 SNORD50.1-201ENST00000362987 71 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 SNORD113-8-201ENST00000363497 74 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 Y_RNA.233-201ENST00000364407 101 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 Y_RNA.343-201ENST00000365354 112 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 RPS23P10-201ENST00000416185 486 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 AC134879.1-201ENST00000426062 394 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 RPL23AP28-201ENST00000448062 470 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 RPL7AP56-201ENST00000476420 791 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 RNA5SP318-201ENST00000516352 92 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 SCARNA18.2-201ENST00000516882 84 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 AL442163.3-201ENST00000554110 156 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 AC233702.7-202ENST00000582941 211 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 AC025588.3-201ENST00000604182 274 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 AL590032.1-201ENST00000604920 252 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 AL031777.2-201ENST00000611953 196 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 MRPL57P1-201ENST00000621486 265 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 AC018445.2-201ENST00000622987 260 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 AC097372.5-201ENST00000623665 376 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 U6.92-201ENST00000636464 89 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 AL031119.1-201ENST00000404707 1879 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 AC068870.1-201ENST00000563737 2455 ntBASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SSBP4Q9BWG4 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 AC144833.1-201ENST00000567953 4089 ntBASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 RNU6-595P-201ENST00000363944 107 ntBASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 RNU6-1243P-201ENST00000364028 107 ntBASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 Y_RNA.292-201ENST00000364904 97 ntBASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 RNU6-290P-201ENST00000365212 101 ntBASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 U8.8-201ENST00000365399 135 ntBASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 Y_RNA.497-201ENST00000384447 98 ntBASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 RNU11-4P-201ENST00000391149 133 ntBASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 AL109941.1-201ENST00000401925 229 ntBASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 U3.39-201ENST00000408569 239 ntBASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 RPS4XP5-201ENST00000419038 768 ntBASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 TMEM167AP1-201ENST00000423409 219 ntBASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 AL357632.1-201ENST00000426688 643 ntBASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 PTMAP6-201ENST00000439110 327 ntBASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 PRELID1P3-201ENST00000450055 643 ntBASIC4.82□□□□□ -1.64
SSBP4Q9BWG4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms