Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 SNORA70E-201ENST00000384492 135 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 MIR670-201ENST00000390142 98 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 MTND4LP20-201ENST00000402379 270 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 RNU2-15P-201ENST00000410692 191 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 RPS7P13-201ENST00000413955 498 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AL590233.1-201ENST00000430017 456 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AC096638.2-201ENST00000434965 711 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 SDCBPP1-201ENST00000440192 890 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 ATP5C1P1-201ENST00000441945 895 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 RPL7P52-201ENST00000449200 742 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 PDSS1P2-201ENST00000449397 678 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 MTND1P27-201ENST00000451117 902 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 SSXP1-201ENST00000453640 473 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 RPS20P24-201ENST00000457473 361 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 RN7SL323P-201ENST00000494712 295 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AP002812.1-201ENST00000495378 474 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AC010625.1-201ENST00000511296 403 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 HIGD1AP3-201ENST00000515857 278 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 IGKV2D-36-201ENST00000518643 226 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AC091516.1-201ENST00000549191 703 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AC068790.2-201ENST00000602601 557 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AL390208.1-201ENST00000605885 644 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AP003117.2-201ENST00000606010 545 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 CR392039.5-201ENST00000623201 510 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 AL392088.2-201ENST00000637607 285 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 SAGE4P-201ENST00000442271 3381 ntBASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PAAF1Q9BRP4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 AC006378.2-201ENST00000623178 2476 ntBASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 AL161781.1-201ENST00000354277 403 ntBASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 Y_RNA.359-201ENST00000365498 102 ntBASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 RNU6-809P-201ENST00000384461 107 ntBASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 MIR153-1-201ENST00000384914 90 ntBASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 PPIAP15-201ENST00000479662 484 ntBASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 MTCO3P44-201ENST00000510977 541 ntBASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 AC093853.1-201ENST00000515689 483 ntBASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 RNA5SP143-201ENST00000516936 115 ntBASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 AC005951.1-201ENST00000576706 485 ntBASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 AC112230.1-201ENST00000604342 547 ntBASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 AL590240.3-201ENST00000621416 943 ntBASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 AC084035.1-201ENST00000634543 607 ntBASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms