Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.69□□□□□ -1.82
CDCA3Q99618 MIR6852-201ENST00000621699 66 ntBASIC3.69□□□□□ -1.82
CDCA3Q99618 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.69□□□□□ -1.82
CDCA3Q99618 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDCA3Q99618 AC090229.1-201ENST00000590983 1609 ntBASIC3.69□□□□□ -1.82
CDCA3Q99618 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.69□□□□□ -1.82
CDCA3Q99618 AC107982.1-201ENST00000507171 1300 ntBASIC3.69□□□□□ -1.82
CDCA3Q99618 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.68□□□□□ -1.82
CDCA3Q99618 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.68□□□□□ -1.82
CDCA3Q99618 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDCA3Q99618 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDCA3Q99618 AL139811.1-201ENST00000424779 2299 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDCA3Q99618 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.68□□□□□ -1.82
CDCA3Q99618 AC011978.2-201ENST00000569835 2054 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 RNA5SP374-201ENST00000362939 125 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 Y_RNA.510-201ENST00000384511 114 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 SSXP10-201ENST00000402595 565 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 Z98941.1-201ENST00000407764 100 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 MTND4P22-201ENST00000413116 1169 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 RPS24P7-201ENST00000416921 246 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDCA3Q99618 OR51AB1P-201ENST00000429046 620 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.68□□□□□ -1.82
CDCA3Q99618 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.68□□□□□ -1.82
CDCA3Q99618 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.68□□□□□ -1.82
CDCA3Q99618 ELOCP8-201ENST00000439309 332 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 ELOCP15-201ENST00000442090 332 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.68□□□□□ -1.82
CDCA3Q99618 Z77249.1-201ENST00000444622 1175 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.68□□□□□ -1.82
CDCA3Q99618 S100A11P2-201ENST00000467589 312 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 OR4G11P-201ENST00000492842 939 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 NIPA2P2-201ENST00000496376 1083 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDCA3Q99618 AC116353.3-201ENST00000511215 249 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.68□□□□□ -1.82
CDCA3Q99618 AC112673.1-201ENST00000513168 575 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.68□□□□□ -1.82
CDCA3Q99618 MTCO1P30-201ENST00000515244 580 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 FABP5P12-201ENST00000515543 389 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 AC027309.2-201ENST00000520566 192 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.68□□□□□ -1.82
CDCA3Q99618 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.68□□□□□ -1.82
CDCA3Q99618 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.68□□□□□ -1.82
CDCA3Q99618 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.68□□□□□ -1.82
CDCA3Q99618 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDCA3Q99618 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.68□□□□□ -1.82
CDCA3Q99618 LSM6P2-201ENST00000552208 177 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.68□□□□□ -1.82
CDCA3Q99618 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.68□□□□□ -1.82
CDCA3Q99618 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.68□□□□□ -1.82
CDCA3Q99618 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.68□□□□□ -1.82
CDCA3Q99618 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.68□□□□□ -1.82
CDCA3Q99618 CKS1BP3-201ENST00000600888 237 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 AC025588.2-201ENST00000604851 466 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 AC010680.4-201ENST00000605334 543 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 AC011816.2-201ENST00000607089 556 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 AC068722.2-201ENST00000618734 544 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 AC109809.1-201ENST00000619665 545 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.68□□□□□ -1.82
CDCA3Q99618 MIR4496-201ENST00000635896 61 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 AL732372.2-225ENST00000642124 456 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CDCA3Q99618 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.68□□□□□ -1.82
CDCA3Q99618 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.68□□□□□ -1.82
CDCA3Q99618 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.68□□□□□ -1.82
CDCA3Q99618 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDCA3Q99618 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDCA3Q99618 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDCA3Q99618 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDCA3Q99618 Y_RNA.25-201ENST00000362528 102 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.67□□□□□ -1.82
CDCA3Q99618 RNU6-657P-201ENST00000383904 107 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 MIR153-1-201ENST00000384914 90 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 RNU2-28P-201ENST00000410457 189 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 RNU4-47P-201ENST00000410876 114 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 RN7SKP53-201ENST00000411337 315 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 BX323014.1-201ENST00000412876 237 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.67□□□□□ -1.82
CDCA3Q99618 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDCA3Q99618 AL008987.1-201ENST00000415528 237 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 HMGB1P49-201ENST00000418882 569 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 PSMA2P3-201ENST00000429685 675 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 AL831737.1-201ENST00000441288 271 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 MTCO2P25-201ENST00000447065 681 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 MTCO3P2-201ENST00000457365 171 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.67□□□□□ -1.82
CDCA3Q99618 RN7SL504P-201ENST00000494496 287 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.67□□□□□ -1.82
CDCA3Q99618 Y_RNA.717-201ENST00000517106 92 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.67□□□□□ -1.82
CDCA3Q99618 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.67□□□□□ -1.82
CDCA3Q99618 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.67□□□□□ -1.82
CDCA3Q99618 MIR4276-201ENST00000584832 70 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 AC012603.1-201ENST00000606424 528 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 AC080013.3-201ENST00000606839 578 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 AC006927.4-201ENST00000639187 543 ntBASIC3.67□□□□□ -1.82
CDCA3Q99618 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDCA3Q99618 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms