Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MAPK10-263ENST00000641052 4307 ntBASIC5.39□□□□□ -1.55
BRF1Q92994 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.39□□□□□ -1.55
BRF1Q92994 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
BRF1Q92994 ZNF137P-201ENST00000456718 1920 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.38□□□□□ -1.55
BRF1Q92994 LINC00622-201ENST00000562811 1570 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.38□□□□□ -1.55
BRF1Q92994 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
BRF1Q92994 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
BRF1Q92994 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
BRF1Q92994 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
BRF1Q92994 RNU6-1120P-201ENST00000362988 108 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 Y_RNA.86-201ENST00000363020 111 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 MIR195-201ENST00000385194 87 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
BRF1Q92994 RN7SKP106-201ENST00000410832 272 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.38□□□□□ -1.55
BRF1Q92994 RPL6P29-201ENST00000414863 865 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.38□□□□□ -1.55
BRF1Q92994 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.38□□□□□ -1.55
BRF1Q92994 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.38□□□□□ -1.55
BRF1Q92994 RPL21P91-201ENST00000429231 479 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
BRF1Q92994 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.38□□□□□ -1.55
BRF1Q92994 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.38□□□□□ -1.55
BRF1Q92994 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.38□□□□□ -1.55
BRF1Q92994 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.38□□□□□ -1.55
BRF1Q92994 AL118496.2-201ENST00000448300 230 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.38□□□□□ -1.55
BRF1Q92994 RN7SL610P-201ENST00000463845 291 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.38□□□□□ -1.55
BRF1Q92994 AC010587.1-201ENST00000505809 469 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.38□□□□□ -1.55
BRF1Q92994 AC010486.1-201ENST00000511793 424 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.38□□□□□ -1.55
BRF1Q92994 AC104057.1-201ENST00000515547 497 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.38□□□□□ -1.55
BRF1Q92994 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.38□□□□□ -1.55
BRF1Q92994 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.38□□□□□ -1.55
BRF1Q92994 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.38□□□□□ -1.55
BRF1Q92994 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.38□□□□□ -1.55
BRF1Q92994 AC055876.1-202ENST00000567053 138 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 AC091178.1-203ENST00000584586 279 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 AC005191.1-201ENST00000603950 358 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 RMST_3.1-201ENST00000611651 109 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 AL049539.1-201ENST00000611964 459 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 CYP3A51P-201ENST00000633513 256 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 AC138649.5-201ENST00000637456 137 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 AC112487.2-201ENST00000637950 304 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
BRF1Q92994 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
BRF1Q92994 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.38□□□□□ -1.55
BRF1Q92994 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
BRF1Q92994 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
BRF1Q92994 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.38□□□□□ -1.55
BRF1Q92994 AC011978.2-201ENST00000569835 2054 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
BRF1Q92994 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.38□□□□□ -1.55
BRF1Q92994 AC108467.2-201ENST00000617640 1597 ntBASIC5.38□□□□□ -1.55
BRF1Q92994 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
BRF1Q92994 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BRF1Q92994 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
BRF1Q92994 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
BRF1Q92994 AC092125.1-201ENST00000562568 1995 ntBASIC5.37□□□□□ -1.55
BRF1Q92994 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
BRF1Q92994 Y_RNA.356-201ENST00000365475 113 ntBASIC5.37□□□□□ -1.55
BRF1Q92994 Y_RNA.529-201ENST00000384586 119 ntBASIC5.37□□□□□ -1.55
BRF1Q92994 SNRPFP1-201ENST00000414761 252 ntBASIC5.37□□□□□ -1.55
BRF1Q92994 MRPL50P2-201ENST00000416821 482 ntBASIC5.37□□□□□ -1.55
BRF1Q92994 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.37□□□□□ -1.55
BRF1Q92994 USP9YP15-201ENST00000442391 422 ntBASIC5.37□□□□□ -1.55
BRF1Q92994 CEACAMP6-201ENST00000452007 574 ntBASIC5.37□□□□□ -1.55
BRF1Q92994 RNU6-261P-201ENST00000459506 102 ntBASIC5.37□□□□□ -1.55
BRF1Q92994 AC006967.1-201ENST00000467608 589 ntBASIC5.37□□□□□ -1.55
BRF1Q92994 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
BRF1Q92994 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
BRF1Q92994 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.37□□□□□ -1.55
BRF1Q92994 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.37□□□□□ -1.55
BRF1Q92994 RPS27AP18-201ENST00000515536 459 ntBASIC5.37□□□□□ -1.55
BRF1Q92994 AL671862.1-201ENST00000515851 349 ntBASIC5.37□□□□□ -1.55
BRF1Q92994 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.37□□□□□ -1.55
BRF1Q92994 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.37□□□□□ -1.55
BRF1Q92994 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BRF1Q92994 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.37□□□□□ -1.55
BRF1Q92994 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.37□□□□□ -1.55
BRF1Q92994 RPS3AP23-202ENST00000574601 686 ntBASIC5.37□□□□□ -1.55
BRF1Q92994 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.37□□□□□ -1.55
BRF1Q92994 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.37□□□□□ -1.55
BRF1Q92994 AL136363.1-201ENST00000605349 337 ntBASIC5.37□□□□□ -1.55
BRF1Q92994 AL122125.1-201ENST00000616999 600 ntBASIC5.37□□□□□ -1.55
BRF1Q92994 AC091953.2-201ENST00000623979 160 ntBASIC5.37□□□□□ -1.55
BRF1Q92994 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
BRF1Q92994 AP001784.1-201ENST00000624107 428 ntBASIC5.37□□□□□ -1.55
BRF1Q92994 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.37□□□□□ -1.55
BRF1Q92994 MAPK10-303ENST00000641324 3959 ntBASIC5.37□□□□□ -1.55
BRF1Q92994 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BRF1Q92994 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BRF1Q92994 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
BRF1Q92994 AC130650.2-201ENST00000618736 2403 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms