Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
TOPBP1Q92547 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
TOPBP1Q92547 AL139156.1-201ENST00000412785 841 ntBASIC3.71□□□□□ -1.82
TOPBP1Q92547 AC073136.2-201ENST00000417282 849 ntBASIC3.71□□□□□ -1.82
TOPBP1Q92547 AC108667.1-201ENST00000428618 249 ntBASIC3.71□□□□□ -1.82
TOPBP1Q92547 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.71□□□□□ -1.82
TOPBP1Q92547 AC072039.1-201ENST00000477611 581 ntBASIC3.71□□□□□ -1.82
TOPBP1Q92547 RPS27AP18-201ENST00000515536 459 ntBASIC3.71□□□□□ -1.82
TOPBP1Q92547 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.71□□□□□ -1.82
TOPBP1Q92547 AC010198.2-201ENST00000550612 259 ntBASIC3.71□□□□□ -1.82
TOPBP1Q92547 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.71□□□□□ -1.82
TOPBP1Q92547 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.71□□□□□ -1.82
TOPBP1Q92547 AC245517.5-201ENST00000611529 162 ntBASIC3.71□□□□□ -1.82
TOPBP1Q92547 AC009831.4-201ENST00000620744 325 ntBASIC3.71□□□□□ -1.82
TOPBP1Q92547 MTND5P23-201ENST00000430812 1655 ntBASIC3.71□□□□□ -1.82
TOPBP1Q92547 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TOPBP1Q92547 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.71□□□□□ -1.82
TOPBP1Q92547 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
TOPBP1Q92547 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.71□□□□□ -1.82
TOPBP1Q92547 AC019155.1-201ENST00000382242 574 ntBASIC3.7□□□□□ -1.82
TOPBP1Q92547 SNORA11.4-201ENST00000408823 129 ntBASIC3.7□□□□□ -1.82
TOPBP1Q92547 AC004866.2-201ENST00000438285 481 ntBASIC3.7□□□□□ -1.82
TOPBP1Q92547 AC245517.2-201ENST00000442890 346 ntBASIC3.7□□□□□ -1.82
TOPBP1Q92547 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.7□□□□□ -1.82
TOPBP1Q92547 CCNHP1-201ENST00000513311 678 ntBASIC3.7□□□□□ -1.82
TOPBP1Q92547 TRAV11-201ENST00000539512 339 ntBASIC3.7□□□□□ -1.82
TOPBP1Q92547 AC023043.2-201ENST00000589678 1026 ntBASIC3.7□□□□□ -1.82
TOPBP1Q92547 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
TOPBP1Q92547 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TOPBP1Q92547 RNU6-14P-201ENST00000384630 106 ntBASIC3.7□□□□□ -1.82
TOPBP1Q92547 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TOPBP1Q92547 Z82205.1-201ENST00000428456 297 ntBASIC3.7□□□□□ -1.82
TOPBP1Q92547 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.7□□□□□ -1.82
TOPBP1Q92547 AC124916.1-201ENST00000444020 547 ntBASIC3.7□□□□□ -1.82
TOPBP1Q92547 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.7□□□□□ -1.82
TOPBP1Q92547 AC093311.1-201ENST00000506586 2021 ntBASIC3.7□□□□□ -1.82
TOPBP1Q92547 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.7□□□□□ -1.82
TOPBP1Q92547 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.7□□□□□ -1.82
TOPBP1Q92547 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.7□□□□□ -1.82
TOPBP1Q92547 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TOPBP1Q92547 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.69□□□□□ -1.82
TOPBP1Q92547 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.69□□□□□ -1.82
TOPBP1Q92547 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
TOPBP1Q92547 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
TOPBP1Q92547 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
TOPBP1Q92547 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TOPBP1Q92547 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TOPBP1Q92547 MIR3074-201ENST00000384885 81 ntBASIC3.69□□□□□ -1.82
TOPBP1Q92547 AC239798.3-201ENST00000454459 408 ntBASIC3.69□□□□□ -1.82
TOPBP1Q92547 RPL38P4-201ENST00000502376 214 ntBASIC3.69□□□□□ -1.82
TOPBP1Q92547 PDCD5P1-201ENST00000543528 309 ntBASIC3.69□□□□□ -1.82
TOPBP1Q92547 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.69□□□□□ -1.82
TOPBP1Q92547 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.69□□□□□ -1.82
TOPBP1Q92547 snoU13.31-201ENST00000607291 104 ntBASIC3.69□□□□□ -1.82
TOPBP1Q92547 AL160394.1-201ENST00000624765 724 ntBASIC3.69□□□□□ -1.82
TOPBP1Q92547 AC008432.1-201ENST00000615912 1320 ntBASIC3.68□□□□□ -1.82
TOPBP1Q92547 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.68□□□□□ -1.82
TOPBP1Q92547 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.68□□□□□ -1.82
TOPBP1Q92547 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TOPBP1Q92547 Y_RNA.269-201ENST00000364685 89 ntBASIC3.68□□□□□ -1.82
TOPBP1Q92547 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TOPBP1Q92547 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.68□□□□□ -1.82
TOPBP1Q92547 HMGB1P11-201ENST00000413899 637 ntBASIC3.68□□□□□ -1.82
TOPBP1Q92547 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.68□□□□□ -1.82
TOPBP1Q92547 SPA17P1-201ENST00000416656 452 ntBASIC3.68□□□□□ -1.82
TOPBP1Q92547 AC013268.2-201ENST00000420753 337 ntBASIC3.68□□□□□ -1.82
TOPBP1Q92547 RPS24P8-201ENST00000431490 402 ntBASIC3.68□□□□□ -1.82
TOPBP1Q92547 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TOPBP1Q92547 RPL7P54-201ENST00000438336 674 ntBASIC3.68□□□□□ -1.82
TOPBP1Q92547 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.68□□□□□ -1.82
TOPBP1Q92547 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.68□□□□□ -1.82
TOPBP1Q92547 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.68□□□□□ -1.82
TOPBP1Q92547 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
TOPBP1Q92547 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.67□□□□□ -1.82
TOPBP1Q92547 MIR21-201ENST00000362134 72 ntBASIC3.67□□□□□ -1.82
TOPBP1Q92547 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.67□□□□□ -1.82
TOPBP1Q92547 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.67□□□□□ -1.82
TOPBP1Q92547 AL445646.1-201ENST00000431784 216 ntBASIC3.67□□□□□ -1.82
TOPBP1Q92547 AL035551.1-201ENST00000446931 348 ntBASIC3.67□□□□□ -1.82
TOPBP1Q92547 RNU6-1053P-201ENST00000515930 101 ntBASIC3.67□□□□□ -1.82
TOPBP1Q92547 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.67□□□□□ -1.82
TOPBP1Q92547 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.67□□□□□ -1.82
TOPBP1Q92547 RFPL1S-203ENST00000539579 330 ntBASIC3.67□□□□□ -1.82
TOPBP1Q92547 GNAI2P1-201ENST00000541815 315 ntBASIC3.67□□□□□ -1.82
TOPBP1Q92547 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.67□□□□□ -1.82
TOPBP1Q92547 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.67□□□□□ -1.82
TOPBP1Q92547 MIR4781-201ENST00000585250 76 ntBASIC3.67□□□□□ -1.82
TOPBP1Q92547 AL445437.1-201ENST00000623157 3087 ntBASIC3.67□□□□□ -1.82
TOPBP1Q92547 MIR142-201ENST00000384835 87 ntBASIC3.66□□□□□ -1.82
TOPBP1Q92547 RNU6-321P-201ENST00000410912 106 ntBASIC3.66□□□□□ -1.82
TOPBP1Q92547 AL009174.1-201ENST00000426577 416 ntBASIC3.66□□□□□ -1.82
TOPBP1Q92547 SNRPFP2-201ENST00000440710 251 ntBASIC3.66□□□□□ -1.82
TOPBP1Q92547 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.66□□□□□ -1.82
TOPBP1Q92547 BMS1P7-201ENST00000602440 1052 ntBASIC3.66□□□□□ -1.82
TOPBP1Q92547 AC093673.2-201ENST00000609674 331 ntBASIC3.66□□□□□ -1.82
TOPBP1Q92547 AC093591.3-201ENST00000634516 308 ntBASIC3.66□□□□□ -1.82
TOPBP1Q92547 WWP1P1-201ENST00000466609 2769 ntBASIC3.66□□□□□ -1.82
TOPBP1Q92547 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TOPBP1Q92547 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.65□□□□□ -1.82
TOPBP1Q92547 RAD1P1-201ENST00000231383 813 ntBASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms