Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 AC127381.1-201ENST00000555979 939 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 MT1CP-201ENST00000567054 174 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 NANOGP3-201ENST00000605855 286 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 MIR6861-201ENST00000618657 64 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 AL606534.2-204ENST00000635008 178 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.75□□□□□ -1.49
DEPDC4Q8N2C3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 Y_RNA.39-201ENST00000362620 98 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 RNU6-1249P-201ENST00000363237 111 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 Y_RNA.152-201ENST00000363578 100 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AL133388.1-201ENST00000404509 287 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 RNU4-78P-201ENST00000410940 126 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC011933.1-201ENST00000413334 321 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 RPL7AP73-201ENST00000413490 353 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC073063.1-201ENST00000434352 607 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 COL11A2P1-205ENST00000441798 676 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC144530.1-201ENST00000452862 555 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC112492.4-201ENST00000456549 352 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC010655.3-201ENST00000478818 450 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC009901.1-201ENST00000506703 541 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 MRPS33P2-201ENST00000507850 322 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC010343.2-201ENST00000510162 224 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC007991.1-201ENST00000522680 631 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC023968.1-201ENST00000560719 475 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC026898.1-201ENST00000586404 571 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 RPL29P33-201ENST00000587474 316 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 NPIPB1P-202ENST00000588786 828 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 MIR6085-201ENST00000618314 110 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 MIR6806-201ENST00000622141 64 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC067931.1-201ENST00000624190 671 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC061999.1-201ENST00000624454 177 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC073593.1-201ENST00000624500 411 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AC000095.2-202ENST00000637415 154 ntBASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
DEPDC4Q8N2C3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 IRF5P1-201ENST00000504852 2164 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 PRO1804-201ENST00000623780 2050 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 RN7SKP15-201ENST00000364742 309 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 SNORA63.7-201ENST00000365579 123 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 RNU6-823P-201ENST00000391042 103 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 PRELID1P1-201ENST00000403549 660 ntBASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.73□□□□□ -1.49
DEPDC4Q8N2C3 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms