Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 MFSD8-219ENST00000641228 2559 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 TTC41P-205ENST00000551270 3963 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
NPAS3Q8IXF0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.45
NPAS3Q8IXF0 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 PRO1804-201ENST00000623780 2050 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 RNA5SP319-201ENST00000362768 119 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 RN7SKP115-201ENST00000363177 317 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 RNU6-984P-201ENST00000363236 109 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 RNU6-1020P-201ENST00000363684 107 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 RNU6-658P-201ENST00000384606 106 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 PRRC2CP1-201ENST00000404428 159 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 U3.39-201ENST00000408569 239 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 BMS1P22-201ENST00000414726 313 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 RPL7P46-201ENST00000425129 740 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 AL450023.1-201ENST00000450868 751 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 AP000797.2-201ENST00000475768 606 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 RPS26P24-201ENST00000497656 331 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 AC104806.1-201ENST00000508720 308 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 RN7SKP288-201ENST00000516227 268 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 RNU6-1338P-201ENST00000516328 91 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 RNU6-323P-201ENST00000521915 107 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 AC011979.2-201ENST00000527568 352 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 MRPS21P7-201ENST00000566937 238 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 SS18L2P2-201ENST00000583960 235 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 Z83818.1-201ENST00000603584 150 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 AC072026.1-201ENST00000605023 201 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 MIR7155-201ENST00000615925 56 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 AL121768.1-201ENST00000613917 2544 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 AL731532.1-201ENST00000623972 4236 ntBASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
NPAS3Q8IXF0 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 AC073365.1-203ENST00000641055 1992 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 Y_RNA.76-201ENST00000362931 109 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 SNORA70.9-201ENST00000384370 135 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 SNORA53-201ENST00000391141 249 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 AL138885.1-201ENST00000405921 675 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 RNU6-394P-201ENST00000410735 107 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 BX276092.3-201ENST00000424182 230 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 CEACAMP9-201ENST00000442990 513 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 NOTCH2P1-201ENST00000443481 624 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 AC005532.2-201ENST00000467154 373 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 AC114982.1-201ENST00000469402 321 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 Y_RNA.713-201ENST00000517013 96 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 OR10G5P-201ENST00000532733 358 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 AC026371.1-201ENST00000551867 419 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 AC106782.4-201ENST00000568264 210 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 MIR3941-201ENST00000582572 103 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 AL451044.1-201ENST00000604867 238 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 AC025034.2-201ENST00000623264 286 ntBASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPAS3Q8IXF0 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms