Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.06□□□□□ -1.92
SKA3Q8IX90 SETP14-201ENST00000497538 873 ntBASIC3.06□□□□□ -1.92
SKA3Q8IX90 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.06□□□□□ -1.92
SKA3Q8IX90 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.06□□□□□ -1.92
SKA3Q8IX90 HMGB3P15-201ENST00000507326 574 ntBASIC3.06□□□□□ -1.92
SKA3Q8IX90 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.06□□□□□ -1.92
SKA3Q8IX90 SNORA67.7-201ENST00000516664 135 ntBASIC3.06□□□□□ -1.92
SKA3Q8IX90 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.06□□□□□ -1.92
SKA3Q8IX90 AC027309.2-201ENST00000520566 192 ntBASIC3.06□□□□□ -1.92
SKA3Q8IX90 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.06□□□□□ -1.92
SKA3Q8IX90 OR5B10P-201ENST00000532869 642 ntBASIC3.06□□□□□ -1.92
SKA3Q8IX90 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.06□□□□□ -1.92
SKA3Q8IX90 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.06□□□□□ -1.92
SKA3Q8IX90 GTF2IP8-201ENST00000560687 584 ntBASIC3.06□□□□□ -1.92
SKA3Q8IX90 AC106754.1-201ENST00000562632 1513 ntBASIC3.06□□□□□ -1.92
SKA3Q8IX90 AC107954.1-201ENST00000565906 727 ntBASIC3.06□□□□□ -1.92
SKA3Q8IX90 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.06□□□□□ -1.92
SKA3Q8IX90 AC138915.2-201ENST00000569776 97 ntBASIC3.06□□□□□ -1.92
SKA3Q8IX90 AC008507.1-201ENST00000587506 734 ntBASIC3.06□□□□□ -1.92
SKA3Q8IX90 AC091946.2-201ENST00000606105 291 ntBASIC3.06□□□□□ -1.92
SKA3Q8IX90 AC022149.2-201ENST00000621061 203 ntBASIC3.06□□□□□ -1.92
SKA3Q8IX90 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SKA3Q8IX90 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.06□□□□□ -1.92
SKA3Q8IX90 MAPK10-362ENST00000641864 4484 ntBASIC3.06□□□□□ -1.92
SKA3Q8IX90 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.06□□□□□ -1.92
SKA3Q8IX90 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SKA3Q8IX90 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SKA3Q8IX90 AL079305.1-201ENST00000623159 3008 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 MIR218-2-201ENST00000385006 110 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 MT-TC-201ENST00000387405 66 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 RNU2-28P-201ENST00000410457 189 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 RPS29P4-201ENST00000414733 161 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 OFD1P18Y-201ENST00000420889 959 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SKA3Q8IX90 MTCO2P23-201ENST00000425216 680 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 BX890604.2-201ENST00000427883 474 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 OR2B8P-201ENST00000432841 938 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 OR10R1P-201ENST00000441524 1141 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 RPL21P23-201ENST00000446654 460 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 PTGES3P5-201ENST00000455109 434 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 PNPLA4P1-201ENST00000458328 305 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC091564.1-201ENST00000464563 479 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC025518.1-201ENST00000479856 347 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC013828.1-201ENST00000481845 158 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 RN7SL283P-201ENST00000489055 303 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 FCF1P3-201ENST00000496394 590 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC020893.1-201ENST00000502452 580 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC113347.3-201ENST00000509113 148 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 MTCYBP16-201ENST00000509187 1129 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 AP003385.6-201ENST00000531603 374 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 MIR4506-201ENST00000584693 77 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 BNIP3P40-201ENST00000596017 556 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC024257.5-201ENST00000612739 531 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC016597.2-201ENST00000613256 341 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC022960.3-201ENST00000619794 441 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC009318.4-201ENST00000620496 486 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC243312.2-201ENST00000623340 601 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 AC244258.1-201ENST00000637553 1071 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 MKKS-204ENST00000639674 192 ntBASIC3.05□□□□□ -1.92
SKA3Q8IX90 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SKA3Q8IX90 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SKA3Q8IX90 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SKA3Q8IX90 MFSD8-233ENST00000641482 4860 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 AC109315.1-201ENST00000584143 1347 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 RNVU1-3-201ENST00000364313 161 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 ATP5F1P3-201ENST00000397213 657 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 AL024474.1-201ENST00000404655 591 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 RNU4-22P-201ENST00000411058 166 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 AL161449.1-201ENST00000414531 1199 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 HMGB3P23-201ENST00000414981 585 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 RPS3AP37-201ENST00000419176 745 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 BX842559.1-201ENST00000419615 532 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 SDCBPP3-201ENST00000419629 891 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms