Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC090897.3-201ENST00000636973 1157 ntBASIC1.43□□□□□ -2.18
VPS13BQ7Z7G8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
VPS13BQ7Z7G8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AC025125.1-201ENST00000624743 1922 ntBASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AMD1P2-201ENST00000412936 992 ntBASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AC009414.1-201ENST00000427200 443 ntBASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 RNA5SP200-201ENST00000516360 103 ntBASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 CKS1BP7-201ENST00000522230 235 ntBASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 GNAI2P1-201ENST00000541815 315 ntBASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AL356266.1-201ENST00000623311 483 ntBASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 RNA5SP129-201ENST00000410276 118 ntBASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 OR4A45P-201ENST00000529954 901 ntBASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AC021269.2-201ENST00000532318 330 ntBASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AL451074.6-201ENST00000608512 729 ntBASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AL513175.2-201ENST00000422071 443 ntBASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AL445646.1-201ENST00000431784 216 ntBASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AC068305.1-201ENST00000497406 726 ntBASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 RNA5SP182-201ENST00000516064 82 ntBASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 TRAV11-201ENST00000539512 339 ntBASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13BQ7Z7G8 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AL353705.4-201ENST00000449661 238 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 FGF7P3-201ENST00000454645 303 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 FAM92A1P2-202ENST00000504766 877 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AC092851.1-201ENST00000535964 478 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 MIR5002-201ENST00000584713 97 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AC010378.1-201ENST00000619270 362 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 Y_RNA.116-201ENST00000363292 103 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AC019155.1-201ENST00000382242 574 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 RPL31P1-201ENST00000398116 372 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 RNU6-1140P-201ENST00000410517 106 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AL390023.1-201ENST00000428836 262 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 NIPA2P2-201ENST00000496376 1083 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 MTCYBP20-201ENST00000524239 1129 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 MTCYBP28-201ENST00000566728 1132 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AP004247.3-201ENST00000608682 624 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AL020991.1-201ENST00000612314 373 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AC084035.1-201ENST00000634543 607 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AL353729.1-201ENST00000425044 720 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AC092185.1-201ENST00000491371 97 ntBASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
VPS13BQ7Z7G8 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
VPS13BQ7Z7G8 RN7SKP282-201ENST00000516824 299 ntBASIC1.4□□□□□ -2.18
VPS13BQ7Z7G8 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.18
VPS13BQ7Z7G8 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms