Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AC087879.1-201ENST00000474343 374 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 RPS21P4-201ENST00000487122 248 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 GLUD1P3-202ENST00000508551 200 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 AC021678.3-201ENST00000517893 476 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 MIR4504-201ENST00000577413 92 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 MIR3691-201ENST00000578066 90 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 AC078899.3-201ENST00000599065 212 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 U2.17-201ENST00000611454 95 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 MIR6820-201ENST00000611508 62 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 AP000550.3-201ENST00000637734 379 ntBASIC6.4□□□□□ -1.38
SH3RF1Q7Z6J0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.4□□□□□ -1.39
SH3RF1Q7Z6J0 PROS2P-201ENST00000474651 1951 ntBASIC6.4□□□□□ -1.39
SH3RF1Q7Z6J0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.4□□□□□ -1.39
SH3RF1Q7Z6J0 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
SH3RF1Q7Z6J0 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 AC140134.1-201ENST00000511830 3544 ntBASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 ZNF402P-201ENST00000404435 3100 ntBASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 RNU1-77P-201ENST00000390868 162 ntBASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 RPS21P8-201ENST00000413365 247 ntBASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 RNF10P1-201ENST00000418589 369 ntBASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 CALM2P2-201ENST00000428512 440 ntBASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 AC138761.5-201ENST00000433967 325 ntBASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 AL772161.1-201ENST00000439130 476 ntBASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 OR1H1P-201ENST00000448731 937 ntBASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 AC103987.1-201ENST00000473394 348 ntBASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 RN7SL570P-201ENST00000484405 292 ntBASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 GZMAP1-201ENST00000503054 631 ntBASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 OR1F2P-201ENST00000570470 933 ntBASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 AC018628.1-201ENST00000624147 3819 ntBASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SH3RF1Q7Z6J0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AL445437.1-201ENST00000623157 3087 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 SNORA20.1-201ENST00000364790 130 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 RNU4-2-201ENST00000365668 141 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 Y_RNA.473-201ENST00000384333 102 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AL645733.1-201ENST00000402250 217 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AL583834.1-201ENST00000406943 343 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 MIR1302-6-201ENST00000408466 90 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 RNU2-36P-201ENST00000410361 191 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 RPL30P2-201ENST00000414021 291 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 GJA6P-201ENST00000415117 1042 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AC114491.1-201ENST00000416095 246 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AC092017.2-201ENST00000427600 362 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 HMGB1P9-201ENST00000429856 646 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 CEP57L1P1-201ENST00000430943 1201 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AC099799.1-201ENST00000439809 192 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 RPS15AP27-201ENST00000449183 343 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AC114801.2-201ENST00000503825 781 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AC024619.4-201ENST00000580924 316 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 MIR4260-201ENST00000583107 67 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AC125232.2-201ENST00000592457 143 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AL049539.1-201ENST00000611964 459 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AC100827.5-201ENST00000615883 426 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AP001784.1-201ENST00000624107 428 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AC091903.1-201ENST00000624322 454 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AL606534.2-204ENST00000635008 178 ntBASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.38□□□□□ -1.39
SH3RF1Q7Z6J0 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms