Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 AC123904.2-201ENST00000548059 300 ntBASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 AL606834.2-201ENST00000602954 668 ntBASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 AC121334.2-201ENST00000605387 271 ntBASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KHDC1Q4VXA5 AC108467.2-201ENST00000617640 1597 ntBASIC4.53□□□□□ -1.69
KHDC1Q4VXA5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.53□□□□□ -1.69
KHDC1Q4VXA5 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 RN7SKP115-201ENST00000363177 317 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 SNORA71.2-201ENST00000364941 134 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 RNU6-761P-201ENST00000384148 107 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 RN7SKP235-201ENST00000410662 305 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 RNA5SP104-201ENST00000410989 118 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 RNA5SP39-201ENST00000411245 120 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 RNU6-195P-201ENST00000411352 109 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 TIMM9P3-201ENST00000428659 274 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 RPS27AP12-201ENST00000429552 465 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 CBX1P1-201ENST00000440184 427 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 AL353748.1-201ENST00000440753 474 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 AL049734.2-201ENST00000441066 616 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 AC112653.1-201ENST00000443851 386 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 ARL2BPP10-201ENST00000446487 531 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 SNORD121B-201ENST00000458838 81 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 snoU109.4-201ENST00000458953 143 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 HMGB1P29-201ENST00000505659 499 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 NPM1P41-201ENST00000512920 831 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 AP003497.1-201ENST00000528472 562 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 OR8L1P-201ENST00000534005 955 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 AL365503.1-201ENST00000605247 905 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 AL355472.4-201ENST00000610233 626 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 AC105429.2-201ENST00000610567 517 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 AC079597.1-201ENST00000624306 508 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 AC087190.4-201ENST00000574616 8334 ntBASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KHDC1Q4VXA5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 AC009902.3-201ENST00000606235 2172 ntBASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 AC011460.1-201ENST00000636268 1834 ntBASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 AC067945.1-201ENST00000342609 618 ntBASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 SNORD74.4-201ENST00000364129 80 ntBASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 AC019155.1-201ENST00000382242 574 ntBASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 Y_RNA.554-201ENST00000384672 102 ntBASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 RPL23AP32-201ENST00000395315 459 ntBASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 Z98745.1-201ENST00000402553 494 ntBASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.51□□□□□ -1.69
KHDC1Q4VXA5 UQCRBP1-201ENST00000421129 336 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms