Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX4Q33E94 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.95□□□□□ -1.94
RFX4Q33E94 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.95□□□□□ -1.94
RFX4Q33E94 HSPE1P28-201ENST00000443139 211 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 RN7SL542P-201ENST00000467147 294 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 MTND3P3-201ENST00000505004 126 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 HMGB1P22-201ENST00000505315 124 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX4Q33E94 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX4Q33E94 MTND4LP22-201ENST00000508209 276 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 AC108043.1-201ENST00000512696 574 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.95□□□□□ -1.94
RFX4Q33E94 MTCO2P32-201ENST00000514865 403 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 snoZ278.1-201ENST00000517059 112 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 AC023632.4-201ENST00000517783 191 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 IGKV2D-36-201ENST00000518643 226 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX4Q33E94 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX4Q33E94 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX4Q33E94 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.95□□□□□ -1.94
RFX4Q33E94 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.95□□□□□ -1.94
RFX4Q33E94 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX4Q33E94 AC087897.1-201ENST00000550134 156 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX4Q33E94 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX4Q33E94 TMF1P1-201ENST00000576058 373 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 SNORD39.3-201ENST00000584451 71 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 AC006130.2-201ENST00000586202 326 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 OR4G1P-201ENST00000588632 938 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.95□□□□□ -1.94
RFX4Q33E94 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RFX4Q33E94 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RFX4Q33E94 AC039056.2-201ENST00000622261 511 ntBASIC2.95□□□□□ -1.94
RFX4Q33E94 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.95□□□□□ -1.94
RFX4Q33E94 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.95□□□□□ -1.94
RFX4Q33E94 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.95□□□□□ -1.94
RFX4Q33E94 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RFX4Q33E94 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RFX4Q33E94 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RFX4Q33E94 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
RFX4Q33E94 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
RFX4Q33E94 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
RFX4Q33E94 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
RFX4Q33E94 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
RFX4Q33E94 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
RFX4Q33E94 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 RNU6-839P-201ENST00000363347 108 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 Y_RNA.126-201ENST00000363382 111 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
RFX4Q33E94 RNU6-629P-201ENST00000384061 103 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.94□□□□□ -1.94
RFX4Q33E94 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.94□□□□□ -1.94
RFX4Q33E94 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.94□□□□□ -1.94
RFX4Q33E94 RPS7P9-201ENST00000414704 586 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 FCF1P2-201ENST00000415284 583 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RFX4Q33E94 USP9YP21-201ENST00000420603 432 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.94□□□□□ -1.94
RFX4Q33E94 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.94□□□□□ -1.94
RFX4Q33E94 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.94□□□□□ -1.94
RFX4Q33E94 AL359073.1-201ENST00000448036 403 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.94□□□□□ -1.94
RFX4Q33E94 GAPDHP39-201ENST00000481866 979 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 RPL7P23-201ENST00000493874 747 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.94□□□□□ -1.94
RFX4Q33E94 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
RFX4Q33E94 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.94□□□□□ -1.94
RFX4Q33E94 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.94□□□□□ -1.94
RFX4Q33E94 AC104057.1-201ENST00000515547 497 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 RNA5SP135-201ENST00000517019 125 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 AC023632.1-201ENST00000518463 375 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 AC026403.1-201ENST00000518938 295 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 AP004371.1-201ENST00000525240 214 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 AC109635.4-202ENST00000531666 412 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 OR5B10P-201ENST00000532869 642 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 OR8K4P-201ENST00000534608 872 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.94□□□□□ -1.94
RFX4Q33E94 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
RFX4Q33E94 AC007566.2-201ENST00000603642 413 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 IGHV3-29-201ENST00000604817 344 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.94□□□□□ -1.94
RFX4Q33E94 AC073348.1-201ENST00000623002 331 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 AP003476.1-201ENST00000623984 516 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 AC010872.1-201ENST00000624225 675 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 AC034229.5-201ENST00000624258 185 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 AC068620.4-201ENST00000636730 1182 ntBASIC2.94□□□□□ -1.94
RFX4Q33E94 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
RFX4Q33E94 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RFX4Q33E94 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.93□□□□□ -1.94
RFX4Q33E94 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RFX4Q33E94 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RFX4Q33E94 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
RFX4Q33E94 MIR217-201ENST00000384817 110 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 RPL7P27-201ENST00000403775 720 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RFX4Q33E94 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.93□□□□□ -1.94
RFX4Q33E94 KCTD10P1-201ENST00000434203 625 ntBASIC2.93□□□□□ -1.94
RFX4Q33E94 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms