Protein–RNA interactions for Protein: Q2TBA0

KLHL40, Kelch-like protein 40, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL40Q2TBA0 FAM60DP-201ENST00000524174 632 ntBASIC3.31□□□□□ -1.88
KLHL40Q2TBA0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.31□□□□□ -1.88
KLHL40Q2TBA0 AL133271.1-201ENST00000538229 291 ntBASIC3.31□□□□□ -1.88
KLHL40Q2TBA0 AC092470.1-201ENST00000546187 132 ntBASIC3.31□□□□□ -1.88
KLHL40Q2TBA0 MIR5680-201ENST00000577577 84 ntBASIC3.31□□□□□ -1.88
KLHL40Q2TBA0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.31□□□□□ -1.88
KLHL40Q2TBA0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.31□□□□□ -1.88
KLHL40Q2TBA0 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.31□□□□□ -1.88
KLHL40Q2TBA0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.31□□□□□ -1.88
KLHL40Q2TBA0 AL162574.2-201ENST00000614618 657 ntBASIC3.31□□□□□ -1.88
KLHL40Q2TBA0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.31□□□□□ -1.88
KLHL40Q2TBA0 AP003400.6-201ENST00000624698 740 ntBASIC3.31□□□□□ -1.88
KLHL40Q2TBA0 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
KLHL40Q2TBA0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KLHL40Q2TBA0 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 RNU6-252P-201ENST00000363232 107 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 MIR483-201ENST00000385070 76 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 SNORA11C-201ENST00000408532 129 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 RNU4-65P-201ENST00000410473 140 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 HMGB3P31-201ENST00000413333 595 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 UBE2V1P9-201ENST00000414760 368 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 RPS3AP9-201ENST00000417027 792 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 AC005189.1-201ENST00000431286 310 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 AC006028.1-201ENST00000438379 402 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 CABYRP1-201ENST00000465493 1045 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 AC003982.1-202ENST00000469928 248 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 AC015724.1-201ENST00000478577 156 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 MTND4LP22-201ENST00000508209 276 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 AC104057.1-201ENST00000515547 497 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 SNORA74D-201ENST00000516404 141 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 MIR3605-201ENST00000583214 100 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 AP001029.3-201ENST00000588063 596 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 AC015871.2-201ENST00000603605 948 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 DPRXP5-201ENST00000604662 539 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 YPEL5P2-201ENST00000605553 359 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 AC005046.1-201ENST00000608515 625 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 CR381653.2-201ENST00000624041 768 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 AL356118.1-201ENST00000635272 1078 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 AC073055.1-201ENST00000456901 1621 ntBASIC3.3□□□□□ -1.88
KLHL40Q2TBA0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 AC006378.2-201ENST00000623178 2476 ntBASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 RNA5SP27-201ENST00000363839 119 ntBASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 SNORA54-201ENST00000384281 123 ntBASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 RNU6-1226P-201ENST00000384317 107 ntBASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 MTCO3P12-201ENST00000416718 547 ntBASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 AC008571.1-201ENST00000467232 300 ntBASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 RPS26P21-201ENST00000475397 348 ntBASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 AC019227.1-201ENST00000526902 510 ntBASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 AC004486.1-201ENST00000546846 233 ntBASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 AC093014.1-201ENST00000548926 724 ntBASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 MIR3670-2-201ENST00000582974 65 ntBASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 MIR3670-1-201ENST00000584160 65 ntBASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 MIR3670-3-201ENST00000584855 65 ntBASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 AL669831.4-202ENST00000590817 238 ntBASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 MIR3670-4-201ENST00000612260 65 ntBASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.29□□□□□ -1.88
KLHL40Q2TBA0 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.28□□□□□ -1.88
KLHL40Q2TBA0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KLHL40Q2TBA0 SNORA25.6-201ENST00000364121 118 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms