Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 RN7SKP123-201ENST00000410732 291 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 UBE2V1P11-201ENST00000411559 285 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 HMGB3P23-201ENST00000414981 585 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 EI24P1-201ENST00000416584 867 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 AC241520.1-201ENST00000422654 1099 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 RPL21P40-201ENST00000428586 483 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 AL512637.2-201ENST00000431287 1256 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SMARCB1Q12824 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 HMGN2P16-201ENST00000456802 261 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 RPL21P18-201ENST00000469899 480 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 VN1R17P-201ENST00000472048 1090 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 RPS26P21-201ENST00000475397 348 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 AC015908.1-201ENST00000478739 476 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 AC010374.2-201ENST00000512933 535 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 AC093755.1-201ENST00000512950 1023 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 RNU1-143P-201ENST00000516296 146 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 SNORA64.4-201ENST00000516632 81 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SMARCB1Q12824 AF131215.7-201ENST00000602443 707 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 IGHV3-29-201ENST00000604817 344 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 AC092574.1-201ENST00000609771 420 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 U1.23-201ENST00000610293 146 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 RNU1-68P-201ENST00000615382 146 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMARCB1Q12824 U1.39-201ENST00000621562 146 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 AC106730.3-201ENST00000624568 641 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 SCARNA15.3-201ENST00000626315 122 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 SCARNA4.1-201ENST00000628597 123 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 AL590396.2-201ENST00000636511 1041 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 AC139713.2-210ENST00000641741 992 ntBASIC3.18□□□□□ -1.9
SMARCB1Q12824 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMARCB1Q12824 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.18□□□□□ -1.9
SMARCB1Q12824 MTND5P24-201ENST00000438892 1767 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SMARCB1Q12824 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SMARCB1Q12824 AC073325.2-201ENST00000339545 159 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMARCB1Q12824 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
SMARCB1Q12824 AL354719.1-201ENST00000406535 843 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 AL583834.1-201ENST00000406943 343 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SMARCB1Q12824 AC008173.1-201ENST00000418901 264 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 GTF2IP23-201ENST00000423746 351 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.17□□□□□ -1.9
SMARCB1Q12824 AC093422.3-201ENST00000428506 305 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.17□□□□□ -1.9
SMARCB1Q12824 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.17□□□□□ -1.9
SMARCB1Q12824 RPL23AP22-201ENST00000437556 453 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 FTH1P1-201ENST00000437933 532 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 RPL23AP33-201ENST00000442301 452 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 MOB1AP2-201ENST00000446060 614 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 GXYLT1P1-201ENST00000446657 490 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.17□□□□□ -1.9
SMARCB1Q12824 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.17□□□□□ -1.9
SMARCB1Q12824 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.17□□□□□ -1.9
SMARCB1Q12824 AC010306.1-201ENST00000523223 1117 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 CR383656.14-201ENST00000551951 406 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.17□□□□□ -1.9
SMARCB1Q12824 ATP5F1P7-201ENST00000567330 760 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 AC106782.4-201ENST00000568264 210 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.17□□□□□ -1.9
SMARCB1Q12824 ATP5A1P2-202ENST00000616464 443 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.17□□□□□ -1.9
SMARCB1Q12824 AC132825.7-201ENST00000638744 335 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SMARCB1Q12824 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMARCB1Q12824 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.17□□□□□ -1.9
SMARCB1Q12824 SEC63P2-201ENST00000503863 1939 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 SAGE4P-201ENST00000442271 3381 ntBASIC3.17□□□□□ -1.9
SMARCB1Q12824 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.16□□□□□ -1.9
SMARCB1Q12824 AC004925.1-201ENST00000624256 2706 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SMARCB1Q12824 SNORD65C-201ENST00000390962 71 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 DNAJC19P6-201ENST00000401853 280 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 EEF1A1P41-201ENST00000414667 207 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.16□□□□□ -1.9
SMARCB1Q12824 B3GNT2P1-201ENST00000434960 952 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 YWHAZP8-201ENST00000436935 731 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 UBE2V1P5-201ENST00000440070 405 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 AL831737.1-201ENST00000441288 271 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 HMGB3P6-201ENST00000444896 598 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 AL096803.2-201ENST00000450032 677 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms