Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSRP1Q08945 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.25□□□□□ -1.57
SSRP1Q08945 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.25□□□□□ -1.57
SSRP1Q08945 MIR548S-201ENST00000581352 82 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.25□□□□□ -1.57
SSRP1Q08945 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.25□□□□□ -1.57
SSRP1Q08945 BPIFA4P-203ENST00000603168 689 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 AL451044.1-201ENST00000604867 238 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.25□□□□□ -1.57
SSRP1Q08945 AC104458.1-201ENST00000608243 463 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 AP001596.2-201ENST00000608410 312 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 AL391813.2-201ENST00000609113 322 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 AC006329.2-201ENST00000611491 394 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.25□□□□□ -1.57
SSRP1Q08945 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.25□□□□□ -1.57
SSRP1Q08945 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSRP1Q08945 AC092435.4-201ENST00000623012 4159 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSRP1Q08945 LINC00622-201ENST00000562811 1570 ntBASIC5.25□□□□□ -1.57
SSRP1Q08945 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.25□□□□□ -1.57
SSRP1Q08945 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSRP1Q08945 MAPK10-304ENST00000641341 3984 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSRP1Q08945 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSRP1Q08945 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.24□□□□□ -1.57
SSRP1Q08945 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSRP1Q08945 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSRP1Q08945 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSRP1Q08945 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSRP1Q08945 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSRP1Q08945 RNY4P14-201ENST00000363656 96 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 RNU1-63P-201ENST00000383902 164 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 RNU6-761P-201ENST00000384148 107 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 RNY3P14-201ENST00000384309 102 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 MIR659-201ENST00000384963 97 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SSRP1Q08945 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSRP1Q08945 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.24□□□□□ -1.57
SSRP1Q08945 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.24□□□□□ -1.57
SSRP1Q08945 AC009480.2-201ENST00000422916 432 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 RPS12P5-201ENST00000423449 371 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.24□□□□□ -1.57
SSRP1Q08945 AC119618.1-201ENST00000434191 222 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 RPS4XP4-201ENST00000443195 763 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.24□□□□□ -1.57
SSRP1Q08945 AL162591.2-201ENST00000449634 317 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 MTND2P24-201ENST00000453434 806 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 AL513533.1-201ENST00000453728 415 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 RPL23AP65-201ENST00000475608 468 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 RPL5P22-201ENST00000480199 884 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 RPL35P6-201ENST00000490024 372 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 AC105914.1-201ENST00000511798 226 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.24□□□□□ -1.57
SSRP1Q08945 AP006289.1-201ENST00000538089 277 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.24□□□□□ -1.57
SSRP1Q08945 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.24□□□□□ -1.57
SSRP1Q08945 AC087283.1-201ENST00000604029 1074 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 AL008729.2-201ENST00000606393 473 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 AL590099.1-201ENST00000615276 138 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 AC040168.1-201ENST00000623594 991 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 AC139769.1-204ENST00000472297 1931 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.24□□□□□ -1.57
SSRP1Q08945 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.24□□□□□ -1.57
SSRP1Q08945 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSRP1Q08945 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSRP1Q08945 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSRP1Q08945 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSRP1Q08945 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSRP1Q08945 RNU4-1-201ENST00000363925 141 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 RNVU1-6-201ENST00000364688 164 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 RNU6-282P-201ENST00000365357 103 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 Y_RNA.402-201ENST00000383972 102 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 Y_RNA.453-201ENST00000384223 109 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 SNORA70E-201ENST00000384492 135 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 EIF4A1P3-201ENST00000411521 244 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.23□□□□□ -1.57
SSRP1Q08945 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSRP1Q08945 MTCO2P19-201ENST00000427513 598 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.23□□□□□ -1.57
SSRP1Q08945 RPL23AP43-201ENST00000446445 471 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.23□□□□□ -1.57
SSRP1Q08945 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.23□□□□□ -1.57
SSRP1Q08945 SNORD121B-201ENST00000458838 81 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 AL139099.1-201ENST00000497398 403 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.23□□□□□ -1.57
SSRP1Q08945 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.23□□□□□ -1.57
SSRP1Q08945 RPL21P7-201ENST00000557463 483 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 AC069061.3-201ENST00000582254 823 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 RPL7P50-201ENST00000600588 727 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 AC008277.2-201ENST00000605196 797 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 AP003117.2-201ENST00000606010 545 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 AP002360.3-201ENST00000607673 710 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
SSRP1Q08945 AP000843.1-201ENST00000624880 701 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.23□□□□□ -1.57
SSRP1Q08945 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.23□□□□□ -1.57
SSRP1Q08945 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SSRP1Q08945 SCN1A-220ENST00000641603 12506 ntBASIC5.23□□□□□ -1.57
SSRP1Q08945 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSRP1Q08945 AC104260.2-201ENST00000623551 3497 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms