Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.53□□□□□ -1.84
CCNA1P78396 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.53□□□□□ -1.84
CCNA1P78396 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.53□□□□□ -1.84
CCNA1P78396 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.53□□□□□ -1.84
CCNA1P78396 AL592295.2-201ENST00000612578 206 ntBASIC3.53□□□□□ -1.84
CCNA1P78396 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.53□□□□□ -1.84
CCNA1P78396 AC018755.4-201ENST00000619715 454 ntBASIC3.53□□□□□ -1.84
CCNA1P78396 CR381572.1-201ENST00000625098 102 ntBASIC3.53□□□□□ -1.84
CCNA1P78396 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.53□□□□□ -1.84
CCNA1P78396 FAM35BP-202ENST00000497389 3337 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCNA1P78396 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCNA1P78396 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCNA1P78396 RNU6-263P-201ENST00000363811 107 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 RNVU1-3-201ENST00000364313 161 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 RNU6-339P-201ENST00000384310 107 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 RNU4-78P-201ENST00000410940 126 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 CR848007.2-201ENST00000424918 787 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.52□□□□□ -1.85
CCNA1P78396 SNRPEP4-201ENST00000435815 279 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.52□□□□□ -1.85
CCNA1P78396 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.52□□□□□ -1.85
CCNA1P78396 RPS15AP1-201ENST00000457423 391 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 RPS23P3-201ENST00000470993 430 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 KC877373.1-201ENST00000479066 408 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 MTND4LP22-201ENST00000508209 276 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 PCBP2P3-201ENST00000509726 843 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.52□□□□□ -1.85
CCNA1P78396 AC118465.1-201ENST00000513820 1271 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 AC091826.1-201ENST00000514065 313 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.52□□□□□ -1.85
CCNA1P78396 RNA5SP367-201ENST00000516557 118 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 SNORD59.2-201ENST00000516873 68 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.52□□□□□ -1.85
CCNA1P78396 AC012254.4-201ENST00000588843 273 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.52□□□□□ -1.85
CCNA1P78396 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.52□□□□□ -1.85
CCNA1P78396 AC073569.3-201ENST00000619055 682 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 AP003485.2-201ENST00000623636 610 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 AC091903.1-201ENST00000624322 454 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.52□□□□□ -1.85
CCNA1P78396 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCNA1P78396 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.52□□□□□ -1.85
CCNA1P78396 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCNA1P78396 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCNA1P78396 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.52□□□□□ -1.85
CCNA1P78396 MTCO1P6-201ENST00000481192 1384 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.51□□□□□ -1.85
CCNA1P78396 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CCNA1P78396 SNORD67-201ENST00000390833 111 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 AL354719.1-201ENST00000406535 843 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 GLRXP1-201ENST00000423261 334 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 AL139132.1-201ENST00000431587 344 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 HMGB3P11-201ENST00000440127 604 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.51□□□□□ -1.85
CCNA1P78396 AC004022.1-201ENST00000447766 1066 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.51□□□□□ -1.85
CCNA1P78396 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.51□□□□□ -1.85
CCNA1P78396 MTND2P6-201ENST00000455337 1030 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.51□□□□□ -1.85
CCNA1P78396 AC006483.1-201ENST00000487308 313 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.51□□□□□ -1.85
CCNA1P78396 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.51□□□□□ -1.85
CCNA1P78396 AC105914.1-201ENST00000511798 226 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 MIR2276-201ENST00000516886 89 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.51□□□□□ -1.85
CCNA1P78396 AL139174.1-201ENST00000531489 886 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.51□□□□□ -1.85
CCNA1P78396 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CCNA1P78396 AL845331.3-202ENST00000562856 261 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.51□□□□□ -1.85
CCNA1P78396 MIR3162-201ENST00000581818 82 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 SNORD84-203ENST00000584275 78 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 AC022146.1-201ENST00000595307 847 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.51□□□□□ -1.85
CCNA1P78396 AC128687.1-201ENST00000605304 619 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 AC112503.2-201ENST00000609005 552 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 AC068831.7-201ENST00000616954 363 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 AC068722.2-201ENST00000618734 544 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.51□□□□□ -1.85
CCNA1P78396 FRG1DP-201ENST00000635586 771 ntBASIC3.51□□□□□ -1.85
CCNA1P78396 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CCNA1P78396 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCNA1P78396 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCNA1P78396 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCNA1P78396 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCNA1P78396 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCNA1P78396 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCNA1P78396 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCNA1P78396 RNU6-441P-201ENST00000384545 106 ntBASIC3.5□□□□□ -1.85
CCNA1P78396 RNU6-851P-201ENST00000384565 107 ntBASIC3.5□□□□□ -1.85
CCNA1P78396 RNU1-101P-201ENST00000391171 127 ntBASIC3.5□□□□□ -1.85
CCNA1P78396 PTP4A1P3-201ENST00000433661 420 ntBASIC3.5□□□□□ -1.85
CCNA1P78396 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.5□□□□□ -1.85
CCNA1P78396 AC093156.1-201ENST00000440382 670 ntBASIC3.5□□□□□ -1.85
CCNA1P78396 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.5□□□□□ -1.85
CCNA1P78396 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.5□□□□□ -1.85
CCNA1P78396 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms