Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AL161909.1-201ENST00000397390 712 ntBASIC1.67□□□□□ -2.14
RPS28P62857 MIR1290-201ENST00000408735 78 ntBASIC1.67□□□□□ -2.14
RPS28P62857 RN7SKP182-201ENST00000410772 298 ntBASIC1.67□□□□□ -2.14
RPS28P62857 RNU6-564P-201ENST00000410983 104 ntBASIC1.67□□□□□ -2.14
RPS28P62857 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC1.67□□□□□ -2.14
RPS28P62857 CYCSP48-201ENST00000417124 323 ntBASIC1.67□□□□□ -2.14
RPS28P62857 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.67□□□□□ -2.14
RPS28P62857 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.67□□□□□ -2.14
RPS28P62857 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.67□□□□□ -2.14
RPS28P62857 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.67□□□□□ -2.14
RPS28P62857 AC016712.1-201ENST00000431088 378 ntBASIC1.67□□□□□ -2.14
RPS28P62857 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.67□□□□□ -2.14
RPS28P62857 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.67□□□□□ -2.14
RPS28P62857 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.67□□□□□ -2.14
RPS28P62857 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC1.67□□□□□ -2.14
RPS28P62857 AL592447.1-201ENST00000447592 540 ntBASIC1.67□□□□□ -2.14
RPS28P62857 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.67□□□□□ -2.14
RPS28P62857 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.67□□□□□ -2.14
RPS28P62857 HMGN3P1-201ENST00000453847 193 ntBASIC1.67□□□□□ -2.14
RPS28P62857 RN7SL177P-201ENST00000476596 299 ntBASIC1.67□□□□□ -2.14
RPS28P62857 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC1.67□□□□□ -2.14
RPS28P62857 RPS3AP6-201ENST00000484430 795 ntBASIC1.67□□□□□ -2.14
RPS28P62857 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC1.67□□□□□ -2.14
RPS28P62857 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC1.67□□□□□ -2.14
RPS28P62857 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC1.67□□□□□ -2.14
RPS28P62857 SCARNA17.1-201ENST00000516211 143 ntBASIC1.67□□□□□ -2.14
RPS28P62857 SCARNA17.2-201ENST00000516334 143 ntBASIC1.67□□□□□ -2.14
RPS28P62857 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.67□□□□□ -2.14
RPS28P62857 RAB9BP1-201ENST00000519581 626 ntBASIC1.67□□□□□ -2.14
RPS28P62857 MRPL49P2-201ENST00000521066 465 ntBASIC1.67□□□□□ -2.14
RPS28P62857 MAL2-208ENST00000523307 556 ntTSL 4 BASIC1.67□□□□□ -2.14
RPS28P62857 OR5AK3P-201ENST00000527486 1297 ntBASIC1.67□□□□□ -2.14
RPS28P62857 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC1.67□□□□□ -2.14
RPS28P62857 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC1.67□□□□□ -2.14
RPS28P62857 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC1.67□□□□□ -2.14
RPS28P62857 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.67□□□□□ -2.14
RPS28P62857 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.67□□□□□ -2.14
RPS28P62857 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.67□□□□□ -2.14
RPS28P62857 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RPS28P62857 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.67□□□□□ -2.14
RPS28P62857 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.67□□□□□ -2.14
RPS28P62857 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC1.67□□□□□ -2.14
RPS28P62857 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC1.67□□□□□ -2.14
RPS28P62857 AC079610.2-201ENST00000604818 690 ntBASIC1.67□□□□□ -2.14
RPS28P62857 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC1.67□□□□□ -2.14
RPS28P62857 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC1.67□□□□□ -2.14
RPS28P62857 AC109309.2-201ENST00000612597 332 ntBASIC1.67□□□□□ -2.14
RPS28P62857 SCARNA17.4-201ENST00000614296 143 ntBASIC1.67□□□□□ -2.14
RPS28P62857 MIR7151-201ENST00000617477 60 ntBASIC1.67□□□□□ -2.14
RPS28P62857 MIR6880-201ENST00000622851 62 ntBASIC1.67□□□□□ -2.14
RPS28P62857 AC010872.1-201ENST00000624225 675 ntBASIC1.67□□□□□ -2.14
RPS28P62857 5S_rRNA.28-201ENST00000638107 119 ntBASIC1.67□□□□□ -2.14
RPS28P62857 AC124944.3-204ENST00000641191 150 ntBASIC1.67□□□□□ -2.14
RPS28P62857 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RPS28P62857 AC005261.4-201ENST00000600047 1385 ntBASIC1.67□□□□□ -2.14
RPS28P62857 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RPS28P62857 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.67□□□□□ -2.14
RPS28P62857 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RPS28P62857 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
RPS28P62857 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
RPS28P62857 RNA5SP234-201ENST00000363916 119 ntBASIC1.66□□□□□ -2.14
RPS28P62857 RNA5SP427-201ENST00000365323 119 ntBASIC1.66□□□□□ -2.14
RPS28P62857 RNU6-921P-201ENST00000384361 107 ntBASIC1.66□□□□□ -2.14
RPS28P62857 MIR649-201ENST00000384843 97 ntBASIC1.66□□□□□ -2.14
RPS28P62857 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
RPS28P62857 AL023807.1-201ENST00000407932 359 ntBASIC1.66□□□□□ -2.14
RPS28P62857 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC1.66□□□□□ -2.14
RPS28P62857 FCF1P2-201ENST00000415284 583 ntBASIC1.66□□□□□ -2.14
RPS28P62857 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.66□□□□□ -2.14
RPS28P62857 COTL1P1-201ENST00000422309 375 ntBASIC1.66□□□□□ -2.14
RPS28P62857 AL139158.1-201ENST00000424719 340 ntBASIC1.66□□□□□ -2.14
RPS28P62857 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.66□□□□□ -2.14
RPS28P62857 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.66□□□□□ -2.14
RPS28P62857 AC019185.3-201ENST00000438805 323 ntBASIC1.66□□□□□ -2.14
RPS28P62857 SETD6P1-201ENST00000444575 317 ntBASIC1.66□□□□□ -2.14
RPS28P62857 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC1.66□□□□□ -2.14
RPS28P62857 BTF3P5-201ENST00000457252 467 ntBASIC1.66□□□□□ -2.14
RPS28P62857 PMCHL2-203ENST00000457791 237 ntBASIC1.66□□□□□ -2.14
RPS28P62857 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.66□□□□□ -2.14
RPS28P62857 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.66□□□□□ -2.14
RPS28P62857 AC105252.1-201ENST00000503089 286 ntBASIC1.66□□□□□ -2.14
RPS28P62857 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.66□□□□□ -2.14
RPS28P62857 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.66□□□□□ -2.14
RPS28P62857 AC104108.1-201ENST00000509930 412 ntBASIC1.66□□□□□ -2.14
RPS28P62857 RNA5SP519-201ENST00000516480 119 ntBASIC1.66□□□□□ -2.14
RPS28P62857 IGLVIV-65-201ENST00000517313 360 ntBASIC1.66□□□□□ -2.14
RPS28P62857 HAUS1P3-201ENST00000523909 662 ntBASIC1.66□□□□□ -2.14
RPS28P62857 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.66□□□□□ -2.14
RPS28P62857 OR8K4P-201ENST00000534608 872 ntBASIC1.66□□□□□ -2.14
RPS28P62857 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC1.66□□□□□ -2.14
RPS28P62857 SARNP-203ENST00000552080 726 ntTSL 2 BASIC1.66□□□□□ -2.14
RPS28P62857 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
RPS28P62857 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.66□□□□□ -2.14
RPS28P62857 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC1.66□□□□□ -2.14
RPS28P62857 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC1.66□□□□□ -2.14
RPS28P62857 AC022662.1-201ENST00000580252 331 ntBASIC1.66□□□□□ -2.14
RPS28P62857 RN7SL339P-201ENST00000580597 296 ntBASIC1.66□□□□□ -2.14
RPS28P62857 MIR4505-201ENST00000582238 73 ntBASIC1.66□□□□□ -2.14
RPS28P62857 AC119501.1-201ENST00000603646 475 ntBASIC1.66□□□□□ -2.14
RPS28P62857 AL137246.1-201ENST00000607072 977 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms