Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MIR4472-2-201ENST00000582069 67 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.34□□□□□ -1.71
CLRN1P58418 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.34□□□□□ -1.71
CLRN1P58418 AL451044.1-201ENST00000604867 238 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 AL121757.2-201ENST00000611223 313 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.34□□□□□ -1.71
CLRN1P58418 AL354950.2-201ENST00000617939 290 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 AC002550.2-201ENST00000621246 394 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.34□□□□□ -1.71
CLRN1P58418 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLRN1P58418 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLRN1P58418 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.34□□□□□ -1.71
CLRN1P58418 SAGE2P-201ENST00000420011 2126 ntBASIC4.34□□□□□ -1.71
CLRN1P58418 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.34□□□□□ -1.72
CLRN1P58418 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.34□□□□□ -1.72
CLRN1P58418 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CLRN1P58418 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
CLRN1P58418 A2MP1-204ENST00000566278 4130 ntBASIC4.34□□□□□ -1.72
CLRN1P58418 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
CLRN1P58418 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLRN1P58418 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CLRN1P58418 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.33□□□□□ -1.72
CLRN1P58418 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.33□□□□□ -1.72
CLRN1P58418 AL138713.1-201ENST00000624026 2130 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.33□□□□□ -1.72
CLRN1P58418 AL359922.3-201ENST00000624779 1670 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 IQCB2P-201ENST00000401788 1633 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 DHX40P1-201ENST00000588725 1412 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.33□□□□□ -1.72
CLRN1P58418 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CLRN1P58418 Y_RNA.72-201ENST00000362894 103 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 RNU5E-8P-201ENST00000363502 116 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 Y_RNA.356-201ENST00000365475 113 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.33□□□□□ -1.72
CLRN1P58418 RNU6-339P-201ENST00000384310 107 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CLRN1P58418 RN7SKP247-201ENST00000411094 308 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 RSU1P3-201ENST00000412878 835 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.33□□□□□ -1.72
CLRN1P58418 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.33□□□□□ -1.72
CLRN1P58418 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.33□□□□□ -1.72
CLRN1P58418 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.33□□□□□ -1.72
CLRN1P58418 RPL21P89-201ENST00000444021 467 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.33□□□□□ -1.72
CLRN1P58418 AC000111.2-201ENST00000448200 210 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.33□□□□□ -1.72
CLRN1P58418 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.33□□□□□ -1.72
CLRN1P58418 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.33□□□□□ -1.72
CLRN1P58418 AL049714.1-201ENST00000466686 347 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 AC053481.1-201ENST00000467217 306 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 RN7SL727P-201ENST00000482164 296 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 AC233702.1-201ENST00000482905 502 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 AC010486.1-201ENST00000511793 424 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.33□□□□□ -1.72
CLRN1P58418 RNU6-709P-201ENST00000517257 104 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.33□□□□□ -1.72
CLRN1P58418 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.33□□□□□ -1.72
CLRN1P58418 AC022790.1-201ENST00000522872 204 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.33□□□□□ -1.72
CLRN1P58418 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.33□□□□□ -1.72
CLRN1P58418 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.33□□□□□ -1.72
CLRN1P58418 AL049839.1-201ENST00000556151 657 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.33□□□□□ -1.72
CLRN1P58418 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.33□□□□□ -1.72
CLRN1P58418 AL138976.2-201ENST00000563989 694 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.33□□□□□ -1.72
CLRN1P58418 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.33□□□□□ -1.72
CLRN1P58418 AC018638.8-201ENST00000588755 281 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 AC011712.1-201ENST00000588959 234 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 GLUD1P4-201ENST00000590914 418 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 AL512782.1-201ENST00000603093 364 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 AC087045.1-201ENST00000605856 382 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 RNU4-89P-201ENST00000607443 133 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 AP001521.2-201ENST00000608772 546 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 AC128687.2-201ENST00000609657 566 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 AC091905.4-201ENST00000623432 202 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 AC040168.1-201ENST00000623594 991 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.33□□□□□ -1.72
CLRN1P58418 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLRN1P58418 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLRN1P58418 THAP12P5-201ENST00000405864 2275 ntBASIC4.33□□□□□ -1.72
CLRN1P58418 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLRN1P58418 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLRN1P58418 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CLRN1P58418 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLRN1P58418 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.32□□□□□ -1.72
CLRN1P58418 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
CLRN1P58418 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CLRN1P58418 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLRN1P58418 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLRN1P58418 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.32□□□□□ -1.72
CLRN1P58418 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CLRN1P58418 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.32□□□□□ -1.72
CLRN1P58418 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLRN1P58418 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLRN1P58418 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
CLRN1P58418 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLRN1P58418 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CLRN1P58418 SNORD51-201ENST00000384320 80 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 RNU6-39P-201ENST00000384344 107 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms