Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.96□□□□□ -1.94
VSX2P58304 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.96□□□□□ -1.94
VSX2P58304 AC008885.1-201ENST00000514930 301 ntBASIC2.96□□□□□ -1.94
VSX2P58304 RNA5SP217-201ENST00000515959 91 ntBASIC2.96□□□□□ -1.94
VSX2P58304 RN7SKP244-201ENST00000516513 307 ntBASIC2.96□□□□□ -1.94
VSX2P58304 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.96□□□□□ -1.94
VSX2P58304 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.96□□□□□ -1.94
VSX2P58304 CR383656.14-201ENST00000551951 406 ntBASIC2.96□□□□□ -1.94
VSX2P58304 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.96□□□□□ -1.94
VSX2P58304 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.96□□□□□ -1.94
VSX2P58304 NIFKP8-201ENST00000560500 874 ntBASIC2.96□□□□□ -1.94
VSX2P58304 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.96□□□□□ -1.94
VSX2P58304 MIR4325-201ENST00000583049 90 ntBASIC2.96□□□□□ -1.94
VSX2P58304 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.96□□□□□ -1.94
VSX2P58304 SNRPGP15-201ENST00000600149 222 ntBASIC2.96□□□□□ -1.94
VSX2P58304 AC007566.2-201ENST00000603642 413 ntBASIC2.96□□□□□ -1.94
VSX2P58304 AC016542.1-201ENST00000608259 493 ntBASIC2.96□□□□□ -1.94
VSX2P58304 AC004832.5-201ENST00000608677 401 ntBASIC2.96□□□□□ -1.94
VSX2P58304 AP004247.3-201ENST00000608682 624 ntBASIC2.96□□□□□ -1.94
VSX2P58304 AL356094.1-201ENST00000624663 1212 ntBASIC2.96□□□□□ -1.94
VSX2P58304 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.96□□□□□ -1.94
VSX2P58304 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.96□□□□□ -1.94
VSX2P58304 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VSX2P58304 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
VSX2P58304 AL512283.1-201ENST00000606756 1384 ntBASIC2.96□□□□□ -1.94
VSX2P58304 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
VSX2P58304 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.95□□□□□ -1.94
VSX2P58304 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VSX2P58304 AF117829.1-206ENST00000621883 3802 ntBASIC2.95□□□□□ -1.94
VSX2P58304 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
VSX2P58304 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VSX2P58304 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.95□□□□□ -1.94
VSX2P58304 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.95□□□□□ -1.94
VSX2P58304 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.95□□□□□ -1.94
VSX2P58304 GNG5P1-201ENST00000255500 204 ntBASIC2.95□□□□□ -1.94
VSX2P58304 RNU6-374P-201ENST00000364146 108 ntBASIC2.95□□□□□ -1.94
VSX2P58304 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VSX2P58304 MIR634-201ENST00000385208 97 ntBASIC2.95□□□□□ -1.94
VSX2P58304 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
VSX2P58304 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VSX2P58304 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.95□□□□□ -1.94
VSX2P58304 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.95□□□□□ -1.94
VSX2P58304 AC006960.1-201ENST00000419980 153 ntBASIC2.95□□□□□ -1.94
VSX2P58304 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.95□□□□□ -1.94
VSX2P58304 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.95□□□□□ -1.94
VSX2P58304 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.95□□□□□ -1.94
VSX2P58304 AC006994.1-201ENST00000438212 839 ntBASIC2.95□□□□□ -1.94
VSX2P58304 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VSX2P58304 RPL32P14-201ENST00000463196 378 ntBASIC2.95□□□□□ -1.94
VSX2P58304 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.95□□□□□ -1.94
VSX2P58304 MTCO3P44-201ENST00000510977 541 ntBASIC2.95□□□□□ -1.94
VSX2P58304 RNU1-143P-201ENST00000516296 146 ntBASIC2.95□□□□□ -1.94
VSX2P58304 RN7SKP272-201ENST00000516988 232 ntBASIC2.95□□□□□ -1.94
VSX2P58304 AC009812.2-201ENST00000517657 457 ntBASIC2.95□□□□□ -1.94
VSX2P58304 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.95□□□□□ -1.94
VSX2P58304 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.95□□□□□ -1.94
VSX2P58304 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.95□□□□□ -1.94
VSX2P58304 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.95□□□□□ -1.94
VSX2P58304 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.95□□□□□ -1.94
VSX2P58304 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.95□□□□□ -1.94
VSX2P58304 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.95□□□□□ -1.94
VSX2P58304 U1.23-201ENST00000610293 146 ntBASIC2.95□□□□□ -1.94
VSX2P58304 RNU1-68P-201ENST00000615382 146 ntBASIC2.95□□□□□ -1.94
VSX2P58304 U1.39-201ENST00000621562 146 ntBASIC2.95□□□□□ -1.94
VSX2P58304 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.95□□□□□ -1.94
VSX2P58304 AC098679.5-201ENST00000624394 571 ntBASIC2.95□□□□□ -1.94
VSX2P58304 MIR622-201ENST00000638396 96 ntBASIC2.95□□□□□ -1.94
VSX2P58304 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VSX2P58304 MTCO1P6-201ENST00000481192 1384 ntBASIC2.95□□□□□ -1.94
VSX2P58304 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.95□□□□□ -1.94
VSX2P58304 PABPC1P7-201ENST00000413177 1513 ntBASIC2.94□□□□□ -1.94
VSX2P58304 SNORA7.2-201ENST00000364446 145 ntBASIC2.94□□□□□ -1.94
VSX2P58304 AL138885.1-201ENST00000405921 675 ntBASIC2.94□□□□□ -1.94
VSX2P58304 RNU4-78P-201ENST00000410940 126 ntBASIC2.94□□□□□ -1.94
VSX2P58304 OR4K6P-201ENST00000416478 897 ntBASIC2.94□□□□□ -1.94
VSX2P58304 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.94□□□□□ -1.94
VSX2P58304 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VSX2P58304 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.94□□□□□ -1.94
VSX2P58304 AL158053.1-201ENST00000441503 453 ntBASIC2.94□□□□□ -1.94
VSX2P58304 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.94□□□□□ -1.94
VSX2P58304 CDC42P1-201ENST00000456658 548 ntBASIC2.94□□□□□ -1.94
VSX2P58304 RPL27AP5-201ENST00000469428 449 ntBASIC2.94□□□□□ -1.94
VSX2P58304 VN1R17P-201ENST00000472048 1090 ntBASIC2.94□□□□□ -1.94
VSX2P58304 HMGB1P38-201ENST00000490557 577 ntBASIC2.94□□□□□ -1.94
VSX2P58304 RPL23AP55-201ENST00000498163 452 ntBASIC2.94□□□□□ -1.94
VSX2P58304 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.94□□□□□ -1.94
VSX2P58304 SCARNA13-201ENST00000516672 275 ntBASIC2.94□□□□□ -1.94
VSX2P58304 AP003049.1-201ENST00000529418 457 ntBASIC2.94□□□□□ -1.94
VSX2P58304 AC124293.1-201ENST00000530034 493 ntBASIC2.94□□□□□ -1.94
VSX2P58304 AC092470.1-201ENST00000546187 132 ntBASIC2.94□□□□□ -1.94
VSX2P58304 MIR4789-201ENST00000577469 82 ntBASIC2.94□□□□□ -1.94
VSX2P58304 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.94□□□□□ -1.94
VSX2P58304 AC006539.2-201ENST00000601729 572 ntBASIC2.94□□□□□ -1.94
VSX2P58304 AL133393.1-201ENST00000603277 287 ntBASIC2.94□□□□□ -1.94
VSX2P58304 AL513477.2-201ENST00000607858 568 ntBASIC2.94□□□□□ -1.94
VSX2P58304 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.94□□□□□ -1.94
VSX2P58304 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
VSX2P58304 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.94□□□□□ -1.94
VSX2P58304 AL121594.5-201ENST00000631724 573 ntBASIC2.94□□□□□ -1.94
VSX2P58304 ZNF37BP-203ENST00000452306 1352 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms