Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MIR622-201ENST00000638396 96 ntBASIC3.2□□□□□ -1.9
CDH6P55285 AL163152.1-201ENST00000642001 374 ntBASIC3.2□□□□□ -1.9
CDH6P55285 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH6P55285 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH6P55285 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH6P55285 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CDH6P55285 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH6P55285 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDH6P55285 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH6P55285 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDH6P55285 RNU6-989P-201ENST00000362756 107 ntBASIC3.19□□□□□ -1.9
CDH6P55285 RPL21P3-201ENST00000395517 478 ntBASIC3.19□□□□□ -1.9
CDH6P55285 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH6P55285 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH6P55285 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH6P55285 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH6P55285 AC104073.1-201ENST00000451988 151 ntBASIC3.19□□□□□ -1.9
CDH6P55285 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH6P55285 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH6P55285 AC146507.2-201ENST00000460608 476 ntBASIC3.19□□□□□ -1.9
CDH6P55285 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
CDH6P55285 RN7SL20P-201ENST00000488827 297 ntBASIC3.19□□□□□ -1.9
CDH6P55285 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDH6P55285 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDH6P55285 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH6P55285 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDH6P55285 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDH6P55285 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.19□□□□□ -1.9
CDH6P55285 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.19□□□□□ -1.9
CDH6P55285 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH6P55285 LSM6P2-201ENST00000552208 177 ntBASIC3.19□□□□□ -1.9
CDH6P55285 AC011611.5-201ENST00000552477 578 ntBASIC3.19□□□□□ -1.9
CDH6P55285 AL121603.1-201ENST00000553815 142 ntBASIC3.19□□□□□ -1.9
CDH6P55285 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH6P55285 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH6P55285 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH6P55285 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH6P55285 AL109653.1-201ENST00000603091 248 ntBASIC3.19□□□□□ -1.9
CDH6P55285 AC128687.1-201ENST00000605304 619 ntBASIC3.19□□□□□ -1.9
CDH6P55285 AC092650.2-201ENST00000619984 902 ntBASIC3.19□□□□□ -1.9
CDH6P55285 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH6P55285 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.19□□□□□ -1.9
CDH6P55285 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH6P55285 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH6P55285 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.19□□□□□ -1.9
CDH6P55285 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH6P55285 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.19□□□□□ -1.9
CDH6P55285 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDH6P55285 MTND5P27-201ENST00000428871 1720 ntBASIC3.19□□□□□ -1.9
CDH6P55285 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH6P55285 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
CDH6P55285 SGO1P1-201ENST00000603525 1447 ntBASIC3.19□□□□□ -1.9
CDH6P55285 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH6P55285 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH6P55285 RNU6-1249P-201ENST00000363237 111 ntBASIC3.18□□□□□ -1.9
CDH6P55285 SNORD46.1-201ENST00000364139 104 ntBASIC3.18□□□□□ -1.9
CDH6P55285 SNORA38.1-201ENST00000364172 131 ntBASIC3.18□□□□□ -1.9
CDH6P55285 RNU6-481P-201ENST00000384194 107 ntBASIC3.18□□□□□ -1.9
CDH6P55285 MIR16-1-201ENST00000385271 89 ntBASIC3.18□□□□□ -1.9
CDH6P55285 SNORD65C-201ENST00000390962 71 ntBASIC3.18□□□□□ -1.9
CDH6P55285 RPL7P25-201ENST00000404151 721 ntBASIC3.18□□□□□ -1.9
CDH6P55285 RNU4-65P-201ENST00000410473 140 ntBASIC3.18□□□□□ -1.9
CDH6P55285 FNDC3CP-201ENST00000420795 1155 ntBASIC3.18□□□□□ -1.9
CDH6P55285 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.18□□□□□ -1.9
CDH6P55285 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH6P55285 OR2AS1P-201ENST00000427827 319 ntBASIC3.18□□□□□ -1.9
CDH6P55285 AL512661.1-201ENST00000434586 1253 ntBASIC3.18□□□□□ -1.9
CDH6P55285 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH6P55285 snoU13.4-201ENST00000458916 104 ntBASIC3.18□□□□□ -1.9
CDH6P55285 RN7SL75P-201ENST00000461926 281 ntBASIC3.18□□□□□ -1.9
CDH6P55285 RPS26P21-201ENST00000475397 348 ntBASIC3.18□□□□□ -1.9
CDH6P55285 HMGN2P13-201ENST00000476476 274 ntBASIC3.18□□□□□ -1.9
CDH6P55285 SETP6-201ENST00000479329 568 ntBASIC3.18□□□□□ -1.9
CDH6P55285 MTND3P24-201ENST00000506306 329 ntBASIC3.18□□□□□ -1.9
CDH6P55285 AC004062.1-201ENST00000509926 645 ntBASIC3.18□□□□□ -1.9
CDH6P55285 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.18□□□□□ -1.9
CDH6P55285 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH6P55285 AC037471.2-201ENST00000564941 598 ntBASIC3.18□□□□□ -1.9
CDH6P55285 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.18□□□□□ -1.9
CDH6P55285 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH6P55285 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH6P55285 BNIP3P33-201ENST00000598912 569 ntBASIC3.18□□□□□ -1.9
CDH6P55285 AL020997.3-201ENST00000602843 359 ntBASIC3.18□□□□□ -1.9
CDH6P55285 YPEL5P2-201ENST00000605553 359 ntBASIC3.18□□□□□ -1.9
CDH6P55285 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH6P55285 VIS1.1-201ENST00000610517 203 ntBASIC3.18□□□□□ -1.9
CDH6P55285 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH6P55285 AL390240.1-201ENST00000612950 384 ntBASIC3.18□□□□□ -1.9
CDH6P55285 AC073968.1-201ENST00000618594 637 ntBASIC3.18□□□□□ -1.9
CDH6P55285 AL445493.3-201ENST00000619568 477 ntBASIC3.18□□□□□ -1.9
CDH6P55285 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH6P55285 FAM35CP-201ENST00000554755 2470 ntBASIC3.18□□□□□ -1.9
CDH6P55285 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH6P55285 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH6P55285 OR5BR1P-201ENST00000524992 1330 ntBASIC3.18□□□□□ -1.9
CDH6P55285 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH6P55285 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH6P55285 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDH6P55285 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CDH6P55285 MTND4LP20-201ENST00000402379 270 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms