Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDX1P52945 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.66□□□□□ -1.82
PDX1P52945 MTCO1P12-201ENST00000414273 1543 ntBASIC3.66□□□□□ -1.82
PDX1P52945 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDX1P52945 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDX1P52945 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDX1P52945 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDX1P52945 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.66□□□□□ -1.82
PDX1P52945 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.66□□□□□ -1.82
PDX1P52945 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PDX1P52945 SNORD82-201ENST00000365530 70 ntBASIC3.66□□□□□ -1.82
PDX1P52945 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PDX1P52945 RNU6-339P-201ENST00000384310 107 ntBASIC3.66□□□□□ -1.82
PDX1P52945 MIR491-201ENST00000384877 84 ntBASIC3.66□□□□□ -1.82
PDX1P52945 RPL7P60-201ENST00000397636 735 ntBASIC3.66□□□□□ -1.82
PDX1P52945 RPL31P1-201ENST00000398116 372 ntBASIC3.66□□□□□ -1.82
PDX1P52945 AL049545.1-201ENST00000401856 572 ntBASIC3.66□□□□□ -1.82
PDX1P52945 AL121972.1-201ENST00000402023 252 ntBASIC3.66□□□□□ -1.82
PDX1P52945 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.66□□□□□ -1.82
PDX1P52945 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.66□□□□□ -1.82
PDX1P52945 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.66□□□□□ -1.82
PDX1P52945 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.66□□□□□ -1.82
PDX1P52945 AC009237.5-201ENST00000414271 501 ntBASIC3.66□□□□□ -1.82
PDX1P52945 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.66□□□□□ -1.82
PDX1P52945 AL953862.1-201ENST00000423016 168 ntBASIC3.66□□□□□ -1.82
PDX1P52945 RWDD4P2-201ENST00000426392 563 ntBASIC3.66□□□□□ -1.82
PDX1P52945 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.66□□□□□ -1.82
PDX1P52945 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.66□□□□□ -1.82
PDX1P52945 AL159987.2-201ENST00000432754 307 ntBASIC3.66□□□□□ -1.82
PDX1P52945 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PDX1P52945 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.66□□□□□ -1.82
PDX1P52945 AC127537.2-201ENST00000439258 465 ntBASIC3.66□□□□□ -1.82
PDX1P52945 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.66□□□□□ -1.82
PDX1P52945 EEF1E1P1-201ENST00000446998 430 ntBASIC3.66□□□□□ -1.82
PDX1P52945 RPL29P29-201ENST00000448725 423 ntBASIC3.66□□□□□ -1.82
PDX1P52945 PPIAP3-201ENST00000450588 505 ntBASIC3.66□□□□□ -1.82
PDX1P52945 OR6C5P-201ENST00000452388 923 ntBASIC3.66□□□□□ -1.82
PDX1P52945 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.66□□□□□ -1.82
PDX1P52945 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.66□□□□□ -1.82
PDX1P52945 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.66□□□□□ -1.82
PDX1P52945 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.66□□□□□ -1.82
PDX1P52945 RNU7-125P-201ENST00000458760 62 ntBASIC3.66□□□□□ -1.82
PDX1P52945 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.66□□□□□ -1.82
PDX1P52945 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.66□□□□□ -1.82
PDX1P52945 HMGN1P11-201ENST00000508668 303 ntBASIC3.66□□□□□ -1.82
PDX1P52945 AC109458.1-201ENST00000508858 316 ntBASIC3.66□□□□□ -1.82
PDX1P52945 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.66□□□□□ -1.82
PDX1P52945 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.66□□□□□ -1.82
PDX1P52945 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
PDX1P52945 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.66□□□□□ -1.82
PDX1P52945 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.66□□□□□ -1.82
PDX1P52945 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.66□□□□□ -1.82
PDX1P52945 AC022695.1-201ENST00000522089 237 ntBASIC3.66□□□□□ -1.82
PDX1P52945 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.66□□□□□ -1.82
PDX1P52945 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PDX1P52945 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.66□□□□□ -1.82
PDX1P52945 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.66□□□□□ -1.82
PDX1P52945 AC007834.2-201ENST00000536310 343 ntBASIC3.66□□□□□ -1.82
PDX1P52945 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.66□□□□□ -1.82
PDX1P52945 AC135001.1-201ENST00000544546 283 ntBASIC3.66□□□□□ -1.82
PDX1P52945 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.66□□□□□ -1.82
PDX1P52945 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.66□□□□□ -1.82
PDX1P52945 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.66□□□□□ -1.82
PDX1P52945 AC025946.2-201ENST00000603398 234 ntBASIC3.66□□□□□ -1.82
PDX1P52945 LLPHP1-201ENST00000603571 367 ntBASIC3.66□□□□□ -1.82
PDX1P52945 AC068313.1-201ENST00000604028 1008 ntBASIC3.66□□□□□ -1.82
PDX1P52945 AC010680.3-201ENST00000604215 520 ntBASIC3.66□□□□□ -1.82
PDX1P52945 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PDX1P52945 AL513477.2-201ENST00000607858 568 ntBASIC3.66□□□□□ -1.82
PDX1P52945 AL139089.1-201ENST00000620372 975 ntBASIC3.66□□□□□ -1.82
PDX1P52945 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PDX1P52945 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.66□□□□□ -1.82
PDX1P52945 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.66□□□□□ -1.82
PDX1P52945 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDX1P52945 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDX1P52945 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PDX1P52945 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDX1P52945 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDX1P52945 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PDX1P52945 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.66□□□□□ -1.82
PDX1P52945 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDX1P52945 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.66□□□□□ -1.82
PDX1P52945 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PDX1P52945 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PDX1P52945 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PDX1P52945 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
PDX1P52945 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PDX1P52945 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PDX1P52945 RNVU1-14-201ENST00000384770 164 ntBASIC3.65□□□□□ -1.83
PDX1P52945 SOD2P1-201ENST00000396543 562 ntBASIC3.65□□□□□ -1.83
PDX1P52945 CYCSP45-201ENST00000402289 315 ntBASIC3.65□□□□□ -1.83
PDX1P52945 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PDX1P52945 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.65□□□□□ -1.83
PDX1P52945 ATP5A1P2-201ENST00000412323 255 ntBASIC3.65□□□□□ -1.83
PDX1P52945 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.65□□□□□ -1.83
PDX1P52945 FNDC3CP-201ENST00000420795 1155 ntBASIC3.65□□□□□ -1.83
PDX1P52945 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.65□□□□□ -1.83
PDX1P52945 AC091390.3-201ENST00000426478 338 ntBASIC3.65□□□□□ -1.83
PDX1P52945 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.65□□□□□ -1.83
PDX1P52945 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms