Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AL669831.4-202ENST00000590817 238 ntBASIC3.34□□□□□ -1.87
CASP4P49662 AC012493.2-201ENST00000595083 291 ntBASIC3.34□□□□□ -1.87
CASP4P49662 AL020997.3-201ENST00000602843 359 ntBASIC3.34□□□□□ -1.87
CASP4P49662 AC092474.3-201ENST00000603022 568 ntBASIC3.34□□□□□ -1.87
CASP4P49662 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.34□□□□□ -1.87
CASP4P49662 AC078880.5-201ENST00000617845 421 ntBASIC3.34□□□□□ -1.87
CASP4P49662 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.34□□□□□ -1.87
CASP4P49662 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.34□□□□□ -1.87
CASP4P49662 MAPK10-362ENST00000641864 4484 ntBASIC3.34□□□□□ -1.87
CASP4P49662 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.34□□□□□ -1.88
CASP4P49662 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.34□□□□□ -1.88
CASP4P49662 AP001350.1-201ENST00000601906 1524 ntBASIC3.34□□□□□ -1.88
CASP4P49662 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.34□□□□□ -1.88
CASP4P49662 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CASP4P49662 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CASP4P49662 AC117529.2-201ENST00000512159 2068 ntBASIC3.33□□□□□ -1.88
CASP4P49662 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.33□□□□□ -1.88
CASP4P49662 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.33□□□□□ -1.88
CASP4P49662 RNU6-339P-201ENST00000384310 107 ntBASIC3.33□□□□□ -1.88
CASP4P49662 Y_RNA.493-201ENST00000384422 102 ntBASIC3.33□□□□□ -1.88
CASP4P49662 SNORA48.8-201ENST00000391324 134 ntBASIC3.33□□□□□ -1.88
CASP4P49662 RPL23AP47-201ENST00000408017 460 ntBASIC3.33□□□□□ -1.88
CASP4P49662 RNA5SP56-201ENST00000410277 118 ntBASIC3.33□□□□□ -1.88
CASP4P49662 AC245054.2-201ENST00000415639 319 ntBASIC3.33□□□□□ -1.88
CASP4P49662 AC009237.2-201ENST00000421358 284 ntBASIC3.33□□□□□ -1.88
CASP4P49662 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.33□□□□□ -1.88
CASP4P49662 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CASP4P49662 FTH1P1-201ENST00000437933 532 ntBASIC3.33□□□□□ -1.88
CASP4P49662 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.33□□□□□ -1.88
CASP4P49662 RPL7P59-201ENST00000447700 943 ntBASIC3.33□□□□□ -1.88
CASP4P49662 RNU7-140P-201ENST00000459546 60 ntBASIC3.33□□□□□ -1.88
CASP4P49662 RN7SL75P-201ENST00000461926 281 ntBASIC3.33□□□□□ -1.88
CASP4P49662 VN1R17P-201ENST00000472048 1090 ntBASIC3.33□□□□□ -1.88
CASP4P49662 HMGB3P15-201ENST00000507326 574 ntBASIC3.33□□□□□ -1.88
CASP4P49662 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.33□□□□□ -1.88
CASP4P49662 AC008885.1-201ENST00000514930 301 ntBASIC3.33□□□□□ -1.88
CASP4P49662 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.33□□□□□ -1.88
CASP4P49662 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CASP4P49662 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.33□□□□□ -1.88
CASP4P49662 MTND4LP25-201ENST00000570218 163 ntBASIC3.33□□□□□ -1.88
CASP4P49662 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.33□□□□□ -1.88
CASP4P49662 MTATP6P2-201ENST00000603319 678 ntBASIC3.33□□□□□ -1.88
CASP4P49662 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.33□□□□□ -1.88
CASP4P49662 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CASP4P49662 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CASP4P49662 AC007318.2-201ENST00000620999 243 ntBASIC3.33□□□□□ -1.88
CASP4P49662 AC098679.5-201ENST00000624394 571 ntBASIC3.33□□□□□ -1.88
CASP4P49662 AL121594.5-201ENST00000631724 573 ntBASIC3.33□□□□□ -1.88
CASP4P49662 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.33□□□□□ -1.88
CASP4P49662 MIR622-201ENST00000638396 96 ntBASIC3.33□□□□□ -1.88
CASP4P49662 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CASP4P49662 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CASP4P49662 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CASP4P49662 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CASP4P49662 AL136164.4-201ENST00000625013 2135 ntBASIC3.32□□□□□ -1.88
CASP4P49662 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.32□□□□□ -1.88
CASP4P49662 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CASP4P49662 RNVU1-3-201ENST00000364313 161 ntBASIC3.32□□□□□ -1.88
CASP4P49662 RPL21P3-201ENST00000395517 478 ntBASIC3.32□□□□□ -1.88
CASP4P49662 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CASP4P49662 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.32□□□□□ -1.88
CASP4P49662 RNU2-71P-201ENST00000411395 189 ntBASIC3.32□□□□□ -1.88
CASP4P49662 AC019070.1-201ENST00000415008 1024 ntBASIC3.32□□□□□ -1.88
CASP4P49662 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.32□□□□□ -1.88
CASP4P49662 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.32□□□□□ -1.88
CASP4P49662 MTCO2P1-201ENST00000424648 477 ntBASIC3.32□□□□□ -1.88
CASP4P49662 AL512649.1-201ENST00000428997 581 ntBASIC3.32□□□□□ -1.88
CASP4P49662 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.32□□□□□ -1.88
CASP4P49662 HMGN2P20-201ENST00000437531 273 ntBASIC3.32□□□□□ -1.88
CASP4P49662 AC127537.2-201ENST00000439258 465 ntBASIC3.32□□□□□ -1.88
CASP4P49662 AC146507.2-201ENST00000460608 476 ntBASIC3.32□□□□□ -1.88
CASP4P49662 RPS3AP43-201ENST00000479743 781 ntBASIC3.32□□□□□ -1.88
CASP4P49662 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
CASP4P49662 OR5H5P-201ENST00000503164 928 ntBASIC3.32□□□□□ -1.88
CASP4P49662 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.32□□□□□ -1.88
CASP4P49662 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.32□□□□□ -1.88
CASP4P49662 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.32□□□□□ -1.88
CASP4P49662 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.32□□□□□ -1.88
CASP4P49662 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.32□□□□□ -1.88
CASP4P49662 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.32□□□□□ -1.88
CASP4P49662 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.32□□□□□ -1.88
CASP4P49662 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CASP4P49662 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.32□□□□□ -1.88
CASP4P49662 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
CASP4P49662 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.32□□□□□ -1.88
CASP4P49662 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.32□□□□□ -1.88
CASP4P49662 AC025588.3-201ENST00000604182 274 ntBASIC3.32□□□□□ -1.88
CASP4P49662 AC124312.4-201ENST00000605533 310 ntBASIC3.32□□□□□ -1.88
CASP4P49662 AC084824.5-201ENST00000612009 413 ntBASIC3.32□□□□□ -1.88
CASP4P49662 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.32□□□□□ -1.88
CASP4P49662 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CASP4P49662 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.32□□□□□ -1.88
CASP4P49662 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CASP4P49662 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.32□□□□□ -1.88
CASP4P49662 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CASP4P49662 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.32□□□□□ -1.88
CASP4P49662 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.32□□□□□ -1.88
CASP4P49662 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CASP4P49662 AC093831.2-201ENST00000624393 3427 ntBASIC3.32□□□□□ -1.88
CASP4P49662 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms