Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 RNU2-42P-201ENST00000410697 113 ntBASIC3.13□□□□□ -1.91
ATRXP46100 RN7SKP192-201ENST00000411291 327 ntBASIC3.13□□□□□ -1.91
ATRXP46100 Z99755.1-201ENST00000414048 380 ntBASIC3.13□□□□□ -1.91
ATRXP46100 AC007435.1-201ENST00000421086 415 ntBASIC3.13□□□□□ -1.91
ATRXP46100 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.13□□□□□ -1.91
ATRXP46100 AL034379.1-201ENST00000423216 253 ntBASIC3.13□□□□□ -1.91
ATRXP46100 PNRC2P1-201ENST00000423940 420 ntBASIC3.13□□□□□ -1.91
ATRXP46100 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.13□□□□□ -1.91
ATRXP46100 AC093716.1-201ENST00000435923 377 ntBASIC3.13□□□□□ -1.91
ATRXP46100 TPMTP4-201ENST00000450749 678 ntBASIC3.13□□□□□ -1.91
ATRXP46100 MTND1P27-201ENST00000451117 902 ntBASIC3.13□□□□□ -1.91
ATRXP46100 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.13□□□□□ -1.91
ATRXP46100 AC097493.1-201ENST00000463958 372 ntBASIC3.13□□□□□ -1.91
ATRXP46100 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.13□□□□□ -1.91
ATRXP46100 RPS27AP9-201ENST00000477681 438 ntBASIC3.13□□□□□ -1.91
ATRXP46100 AC118282.2-201ENST00000508739 374 ntBASIC3.13□□□□□ -1.91
ATRXP46100 AC008885.1-201ENST00000514930 301 ntBASIC3.13□□□□□ -1.91
ATRXP46100 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.13□□□□□ -1.91
ATRXP46100 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.13□□□□□ -1.91
ATRXP46100 AP000926.4-201ENST00000527351 454 ntBASIC3.13□□□□□ -1.91
ATRXP46100 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.13□□□□□ -1.91
ATRXP46100 AC234778.2-201ENST00000566241 354 ntBASIC3.13□□□□□ -1.91
ATRXP46100 AC012213.3-201ENST00000577199 777 ntBASIC3.13□□□□□ -1.91
ATRXP46100 MIR4472-2-201ENST00000582069 67 ntBASIC3.13□□□□□ -1.91
ATRXP46100 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.13□□□□□ -1.91
ATRXP46100 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.13□□□□□ -1.91
ATRXP46100 AL358072.1-201ENST00000604156 575 ntBASIC3.13□□□□□ -1.91
ATRXP46100 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.13□□□□□ -1.91
ATRXP46100 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.13□□□□□ -1.91
ATRXP46100 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ATRXP46100 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
ATRXP46100 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.12□□□□□ -1.91
ATRXP46100 Y_RNA.553-201ENST00000384670 102 ntBASIC3.12□□□□□ -1.91
ATRXP46100 Y_RNA.619-201ENST00000410951 90 ntBASIC3.12□□□□□ -1.91
ATRXP46100 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.12□□□□□ -1.91
ATRXP46100 AL353705.1-201ENST00000433468 480 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.12□□□□□ -1.91
ATRXP46100 RPS4XP13-201ENST00000483219 789 ntBASIC3.12□□□□□ -1.91
ATRXP46100 RPL23AP70-201ENST00000483361 460 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AC023050.1-201ENST00000498198 304 ntBASIC3.12□□□□□ -1.91
ATRXP46100 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.12□□□□□ -1.91
ATRXP46100 PPBPP1-201ENST00000510807 373 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AP003033.1-201ENST00000527244 415 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ATRXP46100 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.12□□□□□ -1.91
ATRXP46100 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.12□□□□□ -1.91
ATRXP46100 AC015712.3-201ENST00000559380 164 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AC068790.2-201ENST00000602601 557 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.12□□□□□ -1.91
ATRXP46100 AC128687.2-201ENST00000609657 566 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AC011939.3-201ENST00000613686 466 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AL158062.1-201ENST00000619632 745 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AC241377.1-201ENST00000619797 406 ntBASIC3.12□□□□□ -1.91
ATRXP46100 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
ATRXP46100 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATRXP46100 AC099063.3-201ENST00000642066 185 ntBASIC3.12□□□□□ -1.91
ATRXP46100 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.12□□□□□ -1.91
ATRXP46100 AC010329.2-201ENST00000595195 2737 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AC116158.1-201ENST00000560231 2129 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AL451142.2-201ENST00000429076 2090 ntBASIC3.12□□□□□ -1.91
ATRXP46100 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC3.12□□□□□ -1.91
ATRXP46100 RNU1-18P-201ENST00000363062 164 ntBASIC3.12□□□□□ -1.91
ATRXP46100 UBE2V1P11-201ENST00000411559 285 ntBASIC3.12□□□□□ -1.91
ATRXP46100 C1DP1-201ENST00000426049 402 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AL390023.1-201ENST00000428836 262 ntBASIC3.12□□□□□ -1.91
ATRXP46100 COX7BP2-201ENST00000437976 242 ntBASIC3.12□□□□□ -1.91
ATRXP46100 SNRPFP2-201ENST00000440710 251 ntBASIC3.12□□□□□ -1.91
ATRXP46100 GTF3AP5-201ENST00000442645 697 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.12□□□□□ -1.91
ATRXP46100 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.12□□□□□ -1.91
ATRXP46100 BET1P1-201ENST00000482276 359 ntBASIC3.12□□□□□ -1.91
ATRXP46100 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.12□□□□□ -1.91
ATRXP46100 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.12□□□□□ -1.91
ATRXP46100 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.12□□□□□ -1.91
ATRXP46100 Y_RNA.688-201ENST00000516565 95 ntBASIC3.12□□□□□ -1.91
ATRXP46100 RN7SKP82-201ENST00000516786 223 ntBASIC3.12□□□□□ -1.91
ATRXP46100 HIGD1AP1-201ENST00000550979 275 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AC023161.2-201ENST00000551218 780 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.12□□□□□ -1.91
ATRXP46100 AC027104.1-201ENST00000563702 681 ntBASIC3.12□□□□□ -1.91
ATRXP46100 SNORD53-201ENST00000579969 78 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.12□□□□□ -1.91
ATRXP46100 AC012254.4-201ENST00000588843 273 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AL031281.1-201ENST00000604049 488 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AC105129.3-201ENST00000605455 485 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AL139286.2-201ENST00000606838 396 ntBASIC3.12□□□□□ -1.91
ATRXP46100 RNVU1-4-201ENST00000612985 164 ntBASIC3.12□□□□□ -1.91
ATRXP46100 MIR7973-1-201ENST00000614683 76 ntBASIC3.12□□□□□ -1.91
ATRXP46100 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.12□□□□□ -1.91
ATRXP46100 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.12□□□□□ -1.91
ATRXP46100 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATRXP46100 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATRXP46100 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
ATRXP46100 MTND4P31-201ENST00000425607 1343 ntBASIC3.11□□□□□ -1.91
ATRXP46100 SAGE2P-201ENST00000420011 2126 ntBASIC3.11□□□□□ -1.91
ATRXP46100 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATRXP46100 RNA5SP27-201ENST00000363839 119 ntBASIC3.11□□□□□ -1.91
ATRXP46100 HNRNPDP2-201ENST00000406475 478 ntBASIC3.11□□□□□ -1.91
ATRXP46100 RPP40P1-201ENST00000426762 456 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms