Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MMP13P45452 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MMP13P45452 RPL23AP38-201ENST00000423801 469 ntBASIC4.27□□□□□ -1.73
MMP13P45452 ZNF863P-201ENST00000426746 417 ntBASIC4.27□□□□□ -1.73
MMP13P45452 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.27□□□□□ -1.73
MMP13P45452 MTND3P23-201ENST00000431980 347 ntBASIC4.27□□□□□ -1.73
MMP13P45452 BTF3P10-201ENST00000433415 495 ntBASIC4.27□□□□□ -1.73
MMP13P45452 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.27□□□□□ -1.73
MMP13P45452 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.27□□□□□ -1.73
MMP13P45452 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MMP13P45452 AL034418.1-201ENST00000448675 860 ntBASIC4.27□□□□□ -1.73
MMP13P45452 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.27□□□□□ -1.73
MMP13P45452 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.27□□□□□ -1.73
MMP13P45452 RPL18AP17-201ENST00000455326 198 ntBASIC4.27□□□□□ -1.73
MMP13P45452 AC105137.1-201ENST00000484355 562 ntBASIC4.27□□□□□ -1.73
MMP13P45452 AF213884.1-201ENST00000488102 463 ntBASIC4.27□□□□□ -1.73
MMP13P45452 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.27□□□□□ -1.73
MMP13P45452 MTCYBP17-201ENST00000503579 789 ntBASIC4.27□□□□□ -1.73
MMP13P45452 IGBP1P5-201ENST00000507524 1000 ntBASIC4.27□□□□□ -1.73
MMP13P45452 HMGB1P28-201ENST00000507778 552 ntBASIC4.27□□□□□ -1.73
MMP13P45452 AC091133.4-201ENST00000511142 308 ntBASIC4.27□□□□□ -1.73
MMP13P45452 AC116347.2-201ENST00000514912 523 ntBASIC4.27□□□□□ -1.73
MMP13P45452 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.27□□□□□ -1.73
MMP13P45452 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MMP13P45452 MIR2114-201ENST00000516645 80 ntBASIC4.27□□□□□ -1.73
MMP13P45452 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.27□□□□□ -1.73
MMP13P45452 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
MMP13P45452 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.27□□□□□ -1.73
MMP13P45452 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.27□□□□□ -1.73
MMP13P45452 ZNF519P2-201ENST00000557032 169 ntBASIC4.27□□□□□ -1.73
MMP13P45452 AC091489.2-201ENST00000566263 604 ntBASIC4.27□□□□□ -1.73
MMP13P45452 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.27□□□□□ -1.73
MMP13P45452 AC128687.2-201ENST00000609657 566 ntBASIC4.27□□□□□ -1.73
MMP13P45452 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.27□□□□□ -1.73
MMP13P45452 AC005332.6-201ENST00000613178 446 ntBASIC4.27□□□□□ -1.73
MMP13P45452 MLECP1-201ENST00000615893 709 ntBASIC4.27□□□□□ -1.73
MMP13P45452 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.27□□□□□ -1.73
MMP13P45452 DUXAP9-208ENST00000622815 614 ntBASIC4.27□□□□□ -1.73
MMP13P45452 CR381653.2-201ENST00000624041 768 ntBASIC4.27□□□□□ -1.73
MMP13P45452 AC079228.1-201ENST00000624774 1049 ntBASIC4.27□□□□□ -1.73
MMP13P45452 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.27□□□□□ -1.73
MMP13P45452 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
MMP13P45452 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
MMP13P45452 LARP1BP1-201ENST00000506036 1359 ntBASIC4.27□□□□□ -1.73
MMP13P45452 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MMP13P45452 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MMP13P45452 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
MMP13P45452 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.26□□□□□ -1.73
MMP13P45452 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.26□□□□□ -1.73
MMP13P45452 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
MMP13P45452 Y_RNA.813-201ENST00000364639 102 ntBASIC4.26□□□□□ -1.73
MMP13P45452 RNU4-12P-201ENST00000365233 139 ntBASIC4.26□□□□□ -1.73
MMP13P45452 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.26□□□□□ -1.73
MMP13P45452 RNU6-780P-201ENST00000391030 104 ntBASIC4.26□□□□□ -1.73
MMP13P45452 Y_RNA.625-201ENST00000411256 107 ntBASIC4.26□□□□□ -1.73
MMP13P45452 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.26□□□□□ -1.73
MMP13P45452 HMGN1P14-201ENST00000412459 517 ntBASIC4.26□□□□□ -1.73
MMP13P45452 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.26□□□□□ -1.73
MMP13P45452 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.26□□□□□ -1.73
MMP13P45452 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.26□□□□□ -1.73
MMP13P45452 AL513175.1-201ENST00000431492 780 ntBASIC4.26□□□□□ -1.73
MMP13P45452 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.26□□□□□ -1.73
MMP13P45452 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MMP13P45452 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.26□□□□□ -1.73
MMP13P45452 RAB11AP1-201ENST00000442978 646 ntBASIC4.26□□□□□ -1.73
MMP13P45452 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.26□□□□□ -1.73
MMP13P45452 NFU1P2-201ENST00000448700 469 ntBASIC4.26□□□□□ -1.73
MMP13P45452 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.26□□□□□ -1.73
MMP13P45452 AC083829.1-201ENST00000503756 657 ntBASIC4.26□□□□□ -1.73
MMP13P45452 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.26□□□□□ -1.73
MMP13P45452 AC117522.1-201ENST00000509821 380 ntBASIC4.26□□□□□ -1.73
MMP13P45452 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.26□□□□□ -1.73
MMP13P45452 AC099522.1-202ENST00000514718 367 ntBASIC4.26□□□□□ -1.73
MMP13P45452 RNU6-528P-201ENST00000516926 100 ntBASIC4.26□□□□□ -1.73
MMP13P45452 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.26□□□□□ -1.73
MMP13P45452 AP002453.2-201ENST00000533503 320 ntBASIC4.26□□□□□ -1.73
MMP13P45452 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.26□□□□□ -1.73
MMP13P45452 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.26□□□□□ -1.73
MMP13P45452 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.26□□□□□ -1.73
MMP13P45452 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.26□□□□□ -1.73
MMP13P45452 HMGB3P26-201ENST00000560051 582 ntBASIC4.26□□□□□ -1.73
MMP13P45452 AC136618.2-201ENST00000575091 400 ntBASIC4.26□□□□□ -1.73
MMP13P45452 AP001004.1-201ENST00000582468 324 ntBASIC4.26□□□□□ -1.73
MMP13P45452 AC011477.5-201ENST00000586571 259 ntBASIC4.26□□□□□ -1.73
MMP13P45452 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.26□□□□□ -1.73
MMP13P45452 AL445567.2-201ENST00000618935 498 ntBASIC4.26□□□□□ -1.73
MMP13P45452 MIR6758-201ENST00000620653 63 ntBASIC4.26□□□□□ -1.73
MMP13P45452 AP006248.2-201ENST00000623309 592 ntBASIC4.26□□□□□ -1.73
MMP13P45452 AC120349.2-201ENST00000625002 298 ntBASIC4.26□□□□□ -1.73
MMP13P45452 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.26□□□□□ -1.73
MMP13P45452 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.26□□□□□ -1.73
MMP13P45452 ATE1-AS1-202ENST00000636460 506 ntBASIC4.26□□□□□ -1.73
MMP13P45452 MIR3688-2-201ENST00000636963 87 ntBASIC4.26□□□□□ -1.73
MMP13P45452 AC009951.1-201ENST00000623674 2614 ntBASIC4.26□□□□□ -1.73
MMP13P45452 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MMP13P45452 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
MMP13P45452 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
MMP13P45452 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
MMP13P45452 AC134882.1-201ENST00000603738 1676 ntBASIC4.26□□□□□ -1.73
MMP13P45452 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms