Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC026634.1-201ENST00000634369 198 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 U6.105-201ENST00000637379 88 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 ZNF663P-202ENST00000641770 1131 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNA3P32297 AC017071.1-201ENST00000564407 2204 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.6□□□□□ -1.83
CHRNA3P32297 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNA3P32297 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CHRNA3P32297 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CHRNA3P32297 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.6□□□□□ -1.83
CHRNA3P32297 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CHRNA3P32297 HMGB1P5-201ENST00000255320 642 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 RNA5SP295-201ENST00000362655 121 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 RNU6-1249P-201ENST00000363237 111 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 RNU5B-4P-201ENST00000363508 111 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 RNU6-236P-201ENST00000363886 106 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 SNORD46.1-201ENST00000364139 104 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHRNA3P32297 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.59□□□□□ -1.83
CHRNA3P32297 AL024474.1-201ENST00000404655 591 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 AC009237.5-201ENST00000414271 501 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 AC007390.1-201ENST00000415722 356 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 AC017079.2-201ENST00000416102 485 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.59□□□□□ -1.83
CHRNA3P32297 BX842559.1-201ENST00000419615 532 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNA3P32297 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNA3P32297 PTP4A1P7-201ENST00000423476 514 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 AL159987.2-201ENST00000432754 307 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.59□□□□□ -1.83
CHRNA3P32297 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNA3P32297 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.59□□□□□ -1.83
CHRNA3P32297 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.59□□□□□ -1.83
CHRNA3P32297 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNA3P32297 AC008264.1-201ENST00000447612 367 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 RBMY2UP-201ENST00000453474 324 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNA3P32297 snoU109.3-201ENST00000459477 145 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNA3P32297 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.59□□□□□ -1.83
CHRNA3P32297 BOLA3P3-201ENST00000505182 232 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.59□□□□□ -1.83
CHRNA3P32297 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNA3P32297 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.59□□□□□ -1.83
CHRNA3P32297 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNA3P32297 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.59□□□□□ -1.83
CHRNA3P32297 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNA3P32297 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNA3P32297 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNA3P32297 MTCYBP27-201ENST00000555160 670 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 AL158211.1-201ENST00000566763 763 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.59□□□□□ -1.83
CHRNA3P32297 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.59□□□□□ -1.83
CHRNA3P32297 AC011468.4-201ENST00000603942 409 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 AP005137.2-201ENST00000609238 400 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 AC006329.2-201ENST00000611491 394 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 AC092650.2-201ENST00000619984 902 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 AC084824.4-201ENST00000620106 731 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 U4.6-201ENST00000621618 127 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CHRNA3P32297 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHRNA3P32297 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CHRNA3P32297 AC111188.2-201ENST00000529697 1387 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 MTND4P34-201ENST00000572715 1371 ntBASIC3.59□□□□□ -1.83
CHRNA3P32297 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHRNA3P32297 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.59□□□□□ -1.84
CHRNA3P32297 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.84
CHRNA3P32297 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CHRNA3P32297 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
CHRNA3P32297 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA3P32297 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA3P32297 AC244517.1-201ENST00000606030 2086 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA3P32297 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CHRNA3P32297 MIR208A-201ENST00000362287 71 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 RNA5SP50-201ENST00000363731 107 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.58□□□□□ -1.84
CHRNA3P32297 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA3P32297 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA3P32297 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CHRNA3P32297 AL133264.1-201ENST00000407157 562 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 RNA5SP293-201ENST00000410527 113 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 AC126124.2-201ENST00000413542 321 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 AL356968.1-201ENST00000416622 474 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 AC245291.1-201ENST00000419501 328 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 GTF2IP23-201ENST00000423746 351 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 MTCO2P17-201ENST00000424336 677 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 BX890604.2-201ENST00000427883 474 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 USP9YP31-201ENST00000431405 881 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 ATP5JP1-201ENST00000431631 322 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 SETP5-201ENST00000437270 562 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 HMGB3P8-201ENST00000449709 577 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CHRNA3P32297 AC097262.1-201ENST00000452559 548 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.58□□□□□ -1.84
CHRNA3P32297 RPS20P24-201ENST00000457473 361 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 AC108078.3-201ENST00000502633 489 ntBASIC3.58□□□□□ -1.84
CHRNA3P32297 AC008427.1-201ENST00000503102 655 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms