Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.03□□□□□ -1.44
RXRBP28702 POU5F1P7-201ENST00000508759 541 ntBASIC6.03□□□□□ -1.44
RXRBP28702 FTH1P21-201ENST00000512179 511 ntBASIC6.03□□□□□ -1.44
RXRBP28702 Y_RNA.672-201ENST00000516289 104 ntBASIC6.03□□□□□ -1.44
RXRBP28702 RNU6-1046P-201ENST00000516538 107 ntBASIC6.03□□□□□ -1.44
RXRBP28702 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.03□□□□□ -1.44
RXRBP28702 AC024224.1-201ENST00000538284 609 ntBASIC6.03□□□□□ -1.44
RXRBP28702 MIR3668-201ENST00000582138 75 ntBASIC6.03□□□□□ -1.44
RXRBP28702 AC136443.5-201ENST00000603741 370 ntBASIC6.03□□□□□ -1.44
RXRBP28702 AC011373.1-201ENST00000607270 237 ntBASIC6.03□□□□□ -1.44
RXRBP28702 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6.03□□□□□ -1.44
RXRBP28702 AL121772.2-201ENST00000614331 297 ntBASIC6.03□□□□□ -1.44
RXRBP28702 AL391261.4-201ENST00000616012 481 ntBASIC6.03□□□□□ -1.44
RXRBP28702 uc_338.13-201ENST00000618243 179 ntBASIC6.03□□□□□ -1.44
RXRBP28702 AC005618.4-201ENST00000625053 554 ntBASIC6.03□□□□□ -1.44
RXRBP28702 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC6.03□□□□□ -1.44
RXRBP28702 AL359955.1-201ENST00000455242 3275 ntBASIC6.03□□□□□ -1.44
RXRBP28702 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC6.03□□□□□ -1.44
RXRBP28702 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
RXRBP28702 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
RXRBP28702 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RXRBP28702 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC6.02□□□□□ -1.45
RXRBP28702 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.02□□□□□ -1.45
RXRBP28702 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RXRBP28702 AP002512.4-202ENST00000641599 4530 ntBASIC6.02□□□□□ -1.45
RXRBP28702 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RXRBP28702 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC6.02□□□□□ -1.45
RXRBP28702 OR11H4-201ENST00000315409 1082 ntBASIC6.02□□□□□ -1.45
RXRBP28702 RNU6-777P-201ENST00000364265 104 ntBASIC6.02□□□□□ -1.45
RXRBP28702 SNORD42.2-201ENST00000365570 69 ntBASIC6.02□□□□□ -1.45
RXRBP28702 RNU6-532P-201ENST00000384318 107 ntBASIC6.02□□□□□ -1.45
RXRBP28702 MIR1303-201ENST00000408625 86 ntBASIC6.02□□□□□ -1.45
RXRBP28702 AL136133.1-201ENST00000413694 376 ntBASIC6.02□□□□□ -1.45
RXRBP28702 NCOR1P3-201ENST00000420479 303 ntBASIC6.02□□□□□ -1.45
RXRBP28702 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RXRBP28702 CBWD4P-201ENST00000445695 655 ntBASIC6.02□□□□□ -1.45
RXRBP28702 MTCO1P27-201ENST00000448269 226 ntBASIC6.02□□□□□ -1.45
RXRBP28702 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC6.02□□□□□ -1.45
RXRBP28702 AC090142.1-201ENST00000465776 462 ntBASIC6.02□□□□□ -1.45
RXRBP28702 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC6.02□□□□□ -1.45
RXRBP28702 AC083798.1-201ENST00000472671 131 ntBASIC6.02□□□□□ -1.45
RXRBP28702 ST13P14-201ENST00000474095 734 ntBASIC6.02□□□□□ -1.45
RXRBP28702 AC006390.1-201ENST00000508068 283 ntBASIC6.02□□□□□ -1.45
RXRBP28702 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
RXRBP28702 AC008958.1-201ENST00000511047 682 ntBASIC6.02□□□□□ -1.45
RXRBP28702 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.02□□□□□ -1.45
RXRBP28702 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC6.02□□□□□ -1.45
RXRBP28702 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.02□□□□□ -1.45
RXRBP28702 PHBP17-201ENST00000528576 541 ntBASIC6.02□□□□□ -1.45
RXRBP28702 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.02□□□□□ -1.45
RXRBP28702 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.02□□□□□ -1.45
RXRBP28702 TVP23BP1-201ENST00000557500 617 ntBASIC6.02□□□□□ -1.45
RXRBP28702 AC068714.1-201ENST00000559623 800 ntBASIC6.02□□□□□ -1.45
RXRBP28702 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC6.02□□□□□ -1.45
RXRBP28702 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.02□□□□□ -1.45
RXRBP28702 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.02□□□□□ -1.45
RXRBP28702 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.02□□□□□ -1.45
RXRBP28702 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RXRBP28702 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RXRBP28702 AC024940.5-201ENST00000622889 474 ntBASIC6.02□□□□□ -1.45
RXRBP28702 SCARNA15.3-201ENST00000626315 122 ntBASIC6.02□□□□□ -1.45
RXRBP28702 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.02□□□□□ -1.45
RXRBP28702 SCARNA4.1-201ENST00000628597 123 ntBASIC6.02□□□□□ -1.45
RXRBP28702 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
RXRBP28702 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RXRBP28702 AC016745.2-201ENST00000608834 3443 ntBASIC6.02□□□□□ -1.45
RXRBP28702 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RXRBP28702 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RXRBP28702 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
RXRBP28702 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RXRBP28702 MTND5P16-201ENST00000460269 1703 ntBASIC6.02□□□□□ -1.45
RXRBP28702 ZNF736P3Y-201ENST00000428264 1465 ntBASIC6.02□□□□□ -1.45
RXRBP28702 NMD3P1-201ENST00000439704 1488 ntBASIC6.02□□□□□ -1.45
RXRBP28702 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
RXRBP28702 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RXRBP28702 CKAP2P1-201ENST00000555477 2049 ntBASIC6.01□□□□□ -1.45
RXRBP28702 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
RXRBP28702 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.01□□□□□ -1.45
RXRBP28702 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RXRBP28702 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RXRBP28702 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RXRBP28702 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC6.01□□□□□ -1.45
RXRBP28702 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RXRBP28702 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RXRBP28702 GNG5P1-201ENST00000255500 204 ntBASIC6.01□□□□□ -1.45
RXRBP28702 MIR331-201ENST00000362302 94 ntBASIC6.01□□□□□ -1.45
RXRBP28702 Y_RNA.25-201ENST00000362528 102 ntBASIC6.01□□□□□ -1.45
RXRBP28702 Y_RNA.145-201ENST00000363527 102 ntBASIC6.01□□□□□ -1.45
RXRBP28702 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC6.01□□□□□ -1.45
RXRBP28702 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RXRBP28702 RNU6-1148P-201ENST00000410992 104 ntBASIC6.01□□□□□ -1.45
RXRBP28702 HMGN2P27-201ENST00000427352 270 ntBASIC6.01□□□□□ -1.45
RXRBP28702 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.01□□□□□ -1.45
RXRBP28702 RPL7AP49-201ENST00000429522 581 ntBASIC6.01□□□□□ -1.45
RXRBP28702 AL591438.1-201ENST00000433508 581 ntBASIC6.01□□□□□ -1.45
RXRBP28702 RPL19P16-201ENST00000433839 588 ntBASIC6.01□□□□□ -1.45
RXRBP28702 AC023347.2-201ENST00000433994 462 ntBASIC6.01□□□□□ -1.45
RXRBP28702 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC6.01□□□□□ -1.45
RXRBP28702 LSM1P1-201ENST00000438629 273 ntBASIC6.01□□□□□ -1.45
RXRBP28702 SEPT14P3-201ENST00000439401 183 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms