Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.47□□□□□ -1.69
CD40P25942 MTCO3P45-201ENST00000443036 613 ntBASIC4.47□□□□□ -1.69
CD40P25942 KNOP1P3-201ENST00000446933 426 ntBASIC4.47□□□□□ -1.69
CD40P25942 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.47□□□□□ -1.69
CD40P25942 RPL7L1P8-201ENST00000469911 741 ntBASIC4.47□□□□□ -1.69
CD40P25942 SNRPCP3-201ENST00000474888 476 ntBASIC4.47□□□□□ -1.69
CD40P25942 RPS27AP1-201ENST00000475545 471 ntBASIC4.47□□□□□ -1.69
CD40P25942 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.47□□□□□ -1.69
CD40P25942 AC093278.1-201ENST00000494700 600 ntBASIC4.47□□□□□ -1.69
CD40P25942 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.47□□□□□ -1.69
CD40P25942 AC092436.1-201ENST00000506450 503 ntBASIC4.47□□□□□ -1.69
CD40P25942 AC004062.1-201ENST00000509926 645 ntBASIC4.47□□□□□ -1.69
CD40P25942 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.47□□□□□ -1.69
CD40P25942 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.47□□□□□ -1.69
CD40P25942 RN7SKP219-201ENST00000516825 296 ntBASIC4.47□□□□□ -1.69
CD40P25942 RNU6-1092P-201ENST00000516955 87 ntBASIC4.47□□□□□ -1.69
CD40P25942 RNA5SP503-201ENST00000517047 117 ntBASIC4.47□□□□□ -1.69
CD40P25942 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.47□□□□□ -1.69
CD40P25942 AC100870.1-201ENST00000522035 505 ntBASIC4.47□□□□□ -1.69
CD40P25942 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.47□□□□□ -1.69
CD40P25942 AC007424.1-203ENST00000554613 687 ntBASIC4.47□□□□□ -1.69
CD40P25942 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.47□□□□□ -1.69
CD40P25942 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
CD40P25942 MIR4719-201ENST00000585233 84 ntBASIC4.47□□□□□ -1.69
CD40P25942 AF038458.1-201ENST00000588406 262 ntBASIC4.47□□□□□ -1.69
CD40P25942 AC012443.1-201ENST00000605605 231 ntBASIC4.47□□□□□ -1.69
CD40P25942 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.47□□□□□ -1.69
CD40P25942 SNHG22-203ENST00000617833 660 ntBASIC4.47□□□□□ -1.69
CD40P25942 AL359697.1-201ENST00000624879 587 ntBASIC4.47□□□□□ -1.69
CD40P25942 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CD40P25942 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CD40P25942 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CD40P25942 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CD40P25942 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.46□□□□□ -1.69
CD40P25942 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CD40P25942 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.46□□□□□ -1.69
CD40P25942 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CD40P25942 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CD40P25942 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
CD40P25942 BDP1P-201ENST00000582658 1990 ntBASIC4.46□□□□□ -1.7
CD40P25942 AL645937.1-201ENST00000641739 1652 ntBASIC4.46□□□□□ -1.7
CD40P25942 AC092326.2-201ENST00000624772 1561 ntBASIC4.46□□□□□ -1.7
CD40P25942 GABPAP-201ENST00000419271 1356 ntBASIC4.46□□□□□ -1.7
CD40P25942 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.46□□□□□ -1.7
CD40P25942 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CD40P25942 Y_RNA.11-201ENST00000362375 109 ntBASIC4.46□□□□□ -1.7
CD40P25942 Y_RNA.356-201ENST00000365475 113 ntBASIC4.46□□□□□ -1.7
CD40P25942 SNORA51.8-201ENST00000384234 132 ntBASIC4.46□□□□□ -1.7
CD40P25942 MT-TD-201ENST00000387419 68 ntBASIC4.46□□□□□ -1.7
CD40P25942 MIR550A3-201ENST00000390735 95 ntBASIC4.46□□□□□ -1.7
CD40P25942 MIR937-201ENST00000401271 86 ntBASIC4.46□□□□□ -1.7
CD40P25942 Z97832.1-201ENST00000402490 328 ntBASIC4.46□□□□□ -1.7
CD40P25942 AL133270.1-201ENST00000402635 279 ntBASIC4.46□□□□□ -1.7
CD40P25942 AL080315.1-201ENST00000406055 466 ntBASIC4.46□□□□□ -1.7
CD40P25942 AL162578.1-201ENST00000406202 378 ntBASIC4.46□□□□□ -1.7
CD40P25942 RNU2-43P-201ENST00000410306 190 ntBASIC4.46□□□□□ -1.7
CD40P25942 RN7SKP114-201ENST00000410327 279 ntBASIC4.46□□□□□ -1.7
CD40P25942 AC114491.1-201ENST00000416095 246 ntBASIC4.46□□□□□ -1.7
CD40P25942 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.46□□□□□ -1.7
CD40P25942 MRPS21P2-201ENST00000424704 264 ntBASIC4.46□□□□□ -1.7
CD40P25942 RPL19P16-201ENST00000433839 588 ntBASIC4.46□□□□□ -1.7
CD40P25942 AL359265.2-201ENST00000434367 631 ntBASIC4.46□□□□□ -1.7
CD40P25942 MTND1P18-201ENST00000448191 573 ntBASIC4.46□□□□□ -1.7
CD40P25942 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.46□□□□□ -1.7
CD40P25942 AC021660.1-201ENST00000465006 554 ntBASIC4.46□□□□□ -1.7
CD40P25942 AC012158.1-204ENST00000483430 465 ntBASIC4.46□□□□□ -1.7
CD40P25942 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.46□□□□□ -1.7
CD40P25942 RNU4-29P-201ENST00000515943 174 ntBASIC4.46□□□□□ -1.7
CD40P25942 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.46□□□□□ -1.7
CD40P25942 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.46□□□□□ -1.7
CD40P25942 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.46□□□□□ -1.7
CD40P25942 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.46□□□□□ -1.7
CD40P25942 AP005435.4-201ENST00000529514 284 ntBASIC4.46□□□□□ -1.7
CD40P25942 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.46□□□□□ -1.7
CD40P25942 AC023050.3-201ENST00000541142 333 ntBASIC4.46□□□□□ -1.7
CD40P25942 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.46□□□□□ -1.7
CD40P25942 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.46□□□□□ -1.7
CD40P25942 AC024940.4-201ENST00000605507 246 ntBASIC4.46□□□□□ -1.7
CD40P25942 AC079684.1-201ENST00000621405 437 ntBASIC4.46□□□□□ -1.7
CD40P25942 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.46□□□□□ -1.7
CD40P25942 AC090617.10-201ENST00000624308 134 ntBASIC4.46□□□□□ -1.7
CD40P25942 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.46□□□□□ -1.7
CD40P25942 U6.114-201ENST00000636407 96 ntBASIC4.46□□□□□ -1.7
CD40P25942 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CD40P25942 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CD40P25942 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CD40P25942 AC004972.1-201ENST00000623934 2209 ntBASIC4.46□□□□□ -1.7
CD40P25942 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CD40P25942 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CD40P25942 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CD40P25942 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
CD40P25942 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
CD40P25942 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CD40P25942 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CD40P25942 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CD40P25942 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CD40P25942 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CD40P25942 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
CD40P25942 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CD40P25942 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms