Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 IPO8P1-201ENST00000455509 3109 ntBASIC3.7□□□□□ -1.82
CDH3P22223 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH3P22223 AC104454.1-201ENST00000421341 1401 ntBASIC3.7□□□□□ -1.82
CDH3P22223 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH3P22223 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH3P22223 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CDH3P22223 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH3P22223 SNRPEP3-201ENST00000338402 276 ntBASIC3.7□□□□□ -1.82
CDH3P22223 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH3P22223 AL023807.1-201ENST00000407932 359 ntBASIC3.7□□□□□ -1.82
CDH3P22223 MIR1250-201ENST00000408098 113 ntBASIC3.7□□□□□ -1.82
CDH3P22223 RPL21P109-201ENST00000422213 475 ntBASIC3.7□□□□□ -1.82
CDH3P22223 KCTD9P3-201ENST00000434597 1169 ntBASIC3.7□□□□□ -1.82
CDH3P22223 AL008629.1-201ENST00000438615 184 ntBASIC3.7□□□□□ -1.82
CDH3P22223 MTND2P20-201ENST00000440805 661 ntBASIC3.7□□□□□ -1.82
CDH3P22223 AL136126.1-201ENST00000473603 402 ntBASIC3.7□□□□□ -1.82
CDH3P22223 AC010301.1-201ENST00000473936 355 ntBASIC3.7□□□□□ -1.82
CDH3P22223 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH3P22223 AC004069.2-201ENST00000505438 1114 ntBASIC3.7□□□□□ -1.82
CDH3P22223 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH3P22223 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH3P22223 SNORA3.4-201ENST00000515969 96 ntBASIC3.7□□□□□ -1.82
CDH3P22223 RNA5SP164-201ENST00000516533 110 ntBASIC3.7□□□□□ -1.82
CDH3P22223 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH3P22223 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH3P22223 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH3P22223 ZNF705CP-201ENST00000530515 889 ntBASIC3.7□□□□□ -1.82
CDH3P22223 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CDH3P22223 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH3P22223 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH3P22223 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.7□□□□□ -1.82
CDH3P22223 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH3P22223 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH3P22223 NIFKP6-201ENST00000598115 845 ntBASIC3.7□□□□□ -1.82
CDH3P22223 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.7□□□□□ -1.82
CDH3P22223 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH3P22223 RMST_8.1-201ENST00000610287 165 ntBASIC3.7□□□□□ -1.82
CDH3P22223 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CDH3P22223 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH3P22223 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH3P22223 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH3P22223 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH3P22223 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH3P22223 AC005183.1-201ENST00000603687 1979 ntBASIC3.7□□□□□ -1.82
CDH3P22223 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CDH3P22223 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH3P22223 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH3P22223 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH3P22223 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH3P22223 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH3P22223 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDH3P22223 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH3P22223 AC130650.2-201ENST00000618736 2403 ntBASIC3.69□□□□□ -1.82
CDH3P22223 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.69□□□□□ -1.82
CDH3P22223 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH3P22223 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CDH3P22223 PTMAP2-201ENST00000397627 327 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AL133384.1-201ENST00000412744 351 ntBASIC3.69□□□□□ -1.82
CDH3P22223 CRYBB2P1-203ENST00000415709 538 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AL139247.1-201ENST00000422768 325 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AL049610.1-201ENST00000423374 372 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AC002075.2-201ENST00000425207 252 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AL591419.1-201ENST00000427423 339 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH3P22223 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.69□□□□□ -1.82
CDH3P22223 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH3P22223 TRGVB-201ENST00000453257 471 ntBASIC3.69□□□□□ -1.82
CDH3P22223 RPL18AP17-201ENST00000455326 198 ntBASIC3.69□□□□□ -1.82
CDH3P22223 TRBV26-201ENST00000456572 344 ntBASIC3.69□□□□□ -1.82
CDH3P22223 HMGN2P16-201ENST00000456802 261 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH3P22223 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH3P22223 ACTR3P3-201ENST00000480448 893 ntBASIC3.69□□□□□ -1.82
CDH3P22223 RPL21P129-201ENST00000491732 478 ntBASIC3.69□□□□□ -1.82
CDH3P22223 RNF138P1-201ENST00000502765 546 ntBASIC3.69□□□□□ -1.82
CDH3P22223 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH3P22223 HMGB3P15-201ENST00000507326 574 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AC026726.1-201ENST00000512859 601 ntBASIC3.69□□□□□ -1.82
CDH3P22223 HIGD1AP3-201ENST00000515857 278 ntBASIC3.69□□□□□ -1.82
CDH3P22223 RN7SKP244-201ENST00000516513 307 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AC105185.1-201ENST00000518705 535 ntBASIC3.69□□□□□ -1.82
CDH3P22223 MTCYBP41-201ENST00000528913 1123 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDH3P22223 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH3P22223 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH3P22223 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH3P22223 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH3P22223 LSM6P2-201ENST00000552208 177 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AC145350.1-201ENST00000567426 208 ntBASIC3.69□□□□□ -1.82
CDH3P22223 LARP7P2-201ENST00000575306 125 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AC005412.1-201ENST00000580812 1049 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH3P22223 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH3P22223 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH3P22223 AC008751.2-201ENST00000597885 980 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AC103881.1-201ENST00000603476 538 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AL357094.1-201ENST00000603845 844 ntBASIC3.69□□□□□ -1.82
CDH3P22223 DPRXP5-201ENST00000604662 539 ntBASIC3.69□□□□□ -1.82
CDH3P22223 AC245389.1-201ENST00000605141 529 ntBASIC3.69□□□□□ -1.82
CDH3P22223 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms