Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.86□□□□□ -1.63
ATF4P18848 AL445363.3-201ENST00000623080 671 ntBASIC4.86□□□□□ -1.63
ATF4P18848 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.86□□□□□ -1.63
ATF4P18848 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.86□□□□□ -1.63
ATF4P18848 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATF4P18848 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATF4P18848 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
ATF4P18848 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATF4P18848 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.86□□□□□ -1.63
ATF4P18848 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATF4P18848 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATF4P18848 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATF4P18848 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
ATF4P18848 AC126323.6-202ENST00000568092 3511 ntBASIC4.85□□□□□ -1.63
ATF4P18848 AC087190.4-201ENST00000574616 8334 ntBASIC4.85□□□□□ -1.63
ATF4P18848 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATF4P18848 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
ATF4P18848 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
ATF4P18848 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATF4P18848 RNA5SP308-201ENST00000362532 115 ntBASIC4.85□□□□□ -1.63
ATF4P18848 RNU4-76P-201ENST00000364509 141 ntBASIC4.85□□□□□ -1.63
ATF4P18848 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC4.85□□□□□ -1.63
ATF4P18848 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATF4P18848 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATF4P18848 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
ATF4P18848 RNU6-434P-201ENST00000384376 107 ntBASIC4.85□□□□□ -1.63
ATF4P18848 RNU6-393P-201ENST00000384475 107 ntBASIC4.85□□□□□ -1.63
ATF4P18848 RNU6-831P-201ENST00000384548 107 ntBASIC4.85□□□□□ -1.63
ATF4P18848 SNORD70.1-201ENST00000391007 85 ntBASIC4.85□□□□□ -1.63
ATF4P18848 EIF4E2P1-201ENST00000393781 255 ntBASIC4.85□□□□□ -1.63
ATF4P18848 BX323014.1-201ENST00000412876 237 ntBASIC4.85□□□□□ -1.63
ATF4P18848 RPL7P10-201ENST00000417407 739 ntBASIC4.85□□□□□ -1.63
ATF4P18848 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.85□□□□□ -1.63
ATF4P18848 FAR2P4-202ENST00000425399 584 ntBASIC4.85□□□□□ -1.63
ATF4P18848 AC093414.1-201ENST00000434712 514 ntBASIC4.85□□□□□ -1.63
ATF4P18848 HMGB1P18-201ENST00000438801 619 ntBASIC4.85□□□□□ -1.63
ATF4P18848 COL11A2P1-205ENST00000441798 676 ntBASIC4.85□□□□□ -1.63
ATF4P18848 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.85□□□□□ -1.63
ATF4P18848 PRPS1P1-201ENST00000445305 876 ntBASIC4.85□□□□□ -1.63
ATF4P18848 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.85□□□□□ -1.63
ATF4P18848 AC087588.1-201ENST00000462203 316 ntBASIC4.85□□□□□ -1.63
ATF4P18848 AL049874.2-201ENST00000492636 288 ntBASIC4.85□□□□□ -1.63
ATF4P18848 RN7SL57P-201ENST00000493687 290 ntBASIC4.85□□□□□ -1.63
ATF4P18848 AC024558.1-201ENST00000505008 528 ntBASIC4.85□□□□□ -1.63
ATF4P18848 HIGD1AP13-201ENST00000509878 289 ntBASIC4.85□□□□□ -1.63
ATF4P18848 AC010343.2-201ENST00000510162 224 ntBASIC4.85□□□□□ -1.63
ATF4P18848 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.85□□□□□ -1.63
ATF4P18848 AC098976.1-201ENST00000513014 541 ntBASIC4.85□□□□□ -1.63
ATF4P18848 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC4.85□□□□□ -1.63
ATF4P18848 SNORA74.1-201ENST00000516320 180 ntBASIC4.85□□□□□ -1.63
ATF4P18848 RNU6-143P-201ENST00000516942 93 ntBASIC4.85□□□□□ -1.63
ATF4P18848 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.85□□□□□ -1.63
ATF4P18848 MYL12AP1-201ENST00000518490 515 ntBASIC4.85□□□□□ -1.63
ATF4P18848 AC090151.1-201ENST00000520784 730 ntBASIC4.85□□□□□ -1.63
ATF4P18848 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATF4P18848 OR11H5P-201ENST00000554039 926 ntBASIC4.85□□□□□ -1.63
ATF4P18848 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.85□□□□□ -1.63
ATF4P18848 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC4.85□□□□□ -1.63
ATF4P18848 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.85□□□□□ -1.63
ATF4P18848 MIR4732-201ENST00000581873 76 ntBASIC4.85□□□□□ -1.63
ATF4P18848 MIR7159-201ENST00000620587 66 ntBASIC4.85□□□□□ -1.63
ATF4P18848 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.85□□□□□ -1.63
ATF4P18848 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.85□□□□□ -1.63
ATF4P18848 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.85□□□□□ -1.63
ATF4P18848 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.85□□□□□ -1.63
ATF4P18848 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATF4P18848 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
ATF4P18848 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATF4P18848 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
ATF4P18848 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATF4P18848 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
ATF4P18848 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATF4P18848 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.85□□□□□ -1.63
ATF4P18848 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATF4P18848 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ATF4P18848 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.84□□□□□ -1.63
ATF4P18848 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
ATF4P18848 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ATF4P18848 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
ATF4P18848 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.84□□□□□ -1.63
ATF4P18848 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.84□□□□□ -1.63
ATF4P18848 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.84□□□□□ -1.63
ATF4P18848 FANCD2P2-201ENST00000437591 1400 ntBASIC4.84□□□□□ -1.63
ATF4P18848 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.84□□□□□ -1.63
ATF4P18848 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC4.84□□□□□ -1.63
ATF4P18848 RNA5SP189-201ENST00000364920 115 ntBASIC4.84□□□□□ -1.63
ATF4P18848 RNU6-1011P-201ENST00000384668 107 ntBASIC4.84□□□□□ -1.63
ATF4P18848 SNORA7A-201ENST00000384765 139 ntBASIC4.84□□□□□ -1.63
ATF4P18848 MIR607-201ENST00000385241 96 ntBASIC4.84□□□□□ -1.63
ATF4P18848 AL590704.1-201ENST00000402856 794 ntBASIC4.84□□□□□ -1.63
ATF4P18848 RN7SKP281-201ENST00000410472 352 ntBASIC4.84□□□□□ -1.63
ATF4P18848 AL591848.1-201ENST00000413092 322 ntBASIC4.84□□□□□ -1.63
ATF4P18848 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.84□□□□□ -1.63
ATF4P18848 BX842559.1-201ENST00000419615 532 ntBASIC4.84□□□□□ -1.63
ATF4P18848 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.84□□□□□ -1.63
ATF4P18848 NRBF2P3-201ENST00000432731 865 ntBASIC4.84□□□□□ -1.63
ATF4P18848 TXNP1-201ENST00000441872 371 ntBASIC4.84□□□□□ -1.63
ATF4P18848 AL513533.1-201ENST00000453728 415 ntBASIC4.84□□□□□ -1.63
ATF4P18848 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.84□□□□□ -1.63
ATF4P18848 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms