Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.22□□□□□ -1.89
RETP07949 MIR3908-201ENST00000579798 126 ntBASIC3.22□□□□□ -1.89
RETP07949 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RETP07949 MIR4435-1-201ENST00000582552 80 ntBASIC3.22□□□□□ -1.89
RETP07949 ELOCP29-201ENST00000588193 334 ntBASIC3.22□□□□□ -1.89
RETP07949 AC067852.3-201ENST00000589177 561 ntBASIC3.22□□□□□ -1.89
RETP07949 AC078899.3-201ENST00000599065 212 ntBASIC3.22□□□□□ -1.89
RETP07949 AC107294.3-201ENST00000609211 526 ntBASIC3.22□□□□□ -1.89
RETP07949 AP001033.2-201ENST00000609701 1003 ntBASIC3.22□□□□□ -1.89
RETP07949 AC092574.1-201ENST00000609771 420 ntBASIC3.22□□□□□ -1.89
RETP07949 AL163051.2-201ENST00000618976 735 ntBASIC3.22□□□□□ -1.89
RETP07949 AC083865.1-201ENST00000636634 831 ntBASIC3.22□□□□□ -1.89
RETP07949 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RETP07949 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
RETP07949 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.89
RETP07949 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
RETP07949 AC016716.1-201ENST00000265882 708 ntBASIC3.21□□□□□ -1.9
RETP07949 SNORA7.4-201ENST00000384249 137 ntBASIC3.21□□□□□ -1.9
RETP07949 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
RETP07949 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RETP07949 HMGB3P31-201ENST00000413333 595 ntBASIC3.21□□□□□ -1.9
RETP07949 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.21□□□□□ -1.9
RETP07949 TRIM60P18-201ENST00000441518 828 ntBASIC3.21□□□□□ -1.9
RETP07949 AC068135.1-201ENST00000446164 246 ntBASIC3.21□□□□□ -1.9
RETP07949 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.21□□□□□ -1.9
RETP07949 AC108078.3-201ENST00000502633 489 ntBASIC3.21□□□□□ -1.9
RETP07949 KCTD9P5-201ENST00000504141 1170 ntBASIC3.21□□□□□ -1.9
RETP07949 AC114967.1-201ENST00000504890 259 ntBASIC3.21□□□□□ -1.9
RETP07949 AC008565.1-201ENST00000509046 885 ntBASIC3.21□□□□□ -1.9
RETP07949 MTCO2P32-201ENST00000514865 403 ntBASIC3.21□□□□□ -1.9
RETP07949 MTND2P26-201ENST00000528255 1029 ntBASIC3.21□□□□□ -1.9
RETP07949 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RETP07949 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RETP07949 AC005476.1-201ENST00000554427 397 ntBASIC3.21□□□□□ -1.9
RETP07949 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.21□□□□□ -1.9
RETP07949 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.21□□□□□ -1.9
RETP07949 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.21□□□□□ -1.9
RETP07949 AC015917.1-201ENST00000579654 510 ntBASIC3.21□□□□□ -1.9
RETP07949 RPL23AP92-201ENST00000603609 255 ntBASIC3.21□□□□□ -1.9
RETP07949 AL390240.1-201ENST00000612950 384 ntBASIC3.21□□□□□ -1.9
RETP07949 AC097372.4-201ENST00000625025 466 ntBASIC3.21□□□□□ -1.9
RETP07949 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
RETP07949 AC092435.3-201ENST00000565538 3654 ntBASIC3.21□□□□□ -1.9
RETP07949 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.21□□□□□ -1.9
RETP07949 AL136360.1-201ENST00000503377 1900 ntBASIC3.21□□□□□ -1.9
RETP07949 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.2□□□□□ -1.9
RETP07949 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.2□□□□□ -1.9
RETP07949 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RETP07949 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RETP07949 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RETP07949 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.2□□□□□ -1.9
RETP07949 RNA5SP27-201ENST00000363839 119 ntBASIC3.2□□□□□ -1.9
RETP07949 AL583834.1-201ENST00000406943 343 ntBASIC3.2□□□□□ -1.9
RETP07949 MIR1261-201ENST00000408659 82 ntBASIC3.2□□□□□ -1.9
RETP07949 RNU4-27P-201ENST00000410889 139 ntBASIC3.2□□□□□ -1.9
RETP07949 Z99755.1-201ENST00000414048 380 ntBASIC3.2□□□□□ -1.9
RETP07949 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.2□□□□□ -1.9
RETP07949 VN1R42P-201ENST00000424651 344 ntBASIC3.2□□□□□ -1.9
RETP07949 AL512661.1-201ENST00000434586 1253 ntBASIC3.2□□□□□ -1.9
RETP07949 HMGB3P11-201ENST00000440127 604 ntBASIC3.2□□□□□ -1.9
RETP07949 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.2□□□□□ -1.9
RETP07949 AC092685.1-201ENST00000447960 1243 ntBASIC3.2□□□□□ -1.9
RETP07949 AC126121.1-201ENST00000482313 553 ntBASIC3.2□□□□□ -1.9
RETP07949 RN7SL432P-201ENST00000484057 298 ntBASIC3.2□□□□□ -1.9
RETP07949 AC027338.1-201ENST00000514840 825 ntBASIC3.2□□□□□ -1.9
RETP07949 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.2□□□□□ -1.9
RETP07949 SNORD59.2-201ENST00000516873 68 ntBASIC3.2□□□□□ -1.9
RETP07949 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.2□□□□□ -1.9
RETP07949 MTND1P36-201ENST00000522384 936 ntBASIC3.2□□□□□ -1.9
RETP07949 AC083923.1-201ENST00000523708 376 ntBASIC3.2□□□□□ -1.9
RETP07949 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.2□□□□□ -1.9
RETP07949 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.2□□□□□ -1.9
RETP07949 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.2□□□□□ -1.9
RETP07949 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.2□□□□□ -1.9
RETP07949 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.2□□□□□ -1.9
RETP07949 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.2□□□□□ -1.9
RETP07949 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.2□□□□□ -1.9
RETP07949 SNRPGP15-201ENST00000600149 222 ntBASIC3.2□□□□□ -1.9
RETP07949 AL359535.1-201ENST00000612100 1087 ntBASIC3.2□□□□□ -1.9
RETP07949 RMST_10.1-201ENST00000616309 154 ntBASIC3.2□□□□□ -1.9
RETP07949 AL445493.3-201ENST00000619568 477 ntBASIC3.2□□□□□ -1.9
RETP07949 MTND5P11-201ENST00000511037 1812 ntBASIC3.2□□□□□ -1.9
RETP07949 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RETP07949 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RETP07949 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RETP07949 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
RETP07949 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.19□□□□□ -1.9
RETP07949 SNORA71.1-201ENST00000364523 117 ntBASIC3.19□□□□□ -1.9
RETP07949 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RETP07949 DNAJC19P6-201ENST00000401853 280 ntBASIC3.19□□□□□ -1.9
RETP07949 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.19□□□□□ -1.9
RETP07949 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RETP07949 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.19□□□□□ -1.9
RETP07949 Z93242.1-201ENST00000427102 353 ntBASIC3.19□□□□□ -1.9
RETP07949 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.19□□□□□ -1.9
RETP07949 SETP8-201ENST00000435341 628 ntBASIC3.19□□□□□ -1.9
RETP07949 AP000949.1-201ENST00000438328 629 ntBASIC3.19□□□□□ -1.9
RETP07949 UBE2V1P5-201ENST00000440070 405 ntBASIC3.19□□□□□ -1.9
RETP07949 HMGB1P48-201ENST00000446155 598 ntBASIC3.19□□□□□ -1.9
RETP07949 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms