Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.94□□□□□ -1.94
APOEP02649 DUXAP4-201ENST00000603046 613 ntBASIC2.94□□□□□ -1.94
APOEP02649 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.94□□□□□ -1.94
APOEP02649 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.94□□□□□ -1.94
APOEP02649 AC110792.4-201ENST00000609843 298 ntBASIC2.94□□□□□ -1.94
APOEP02649 AL391597.1-201ENST00000618707 694 ntBASIC2.94□□□□□ -1.94
APOEP02649 ZNF37BP-203ENST00000452306 1352 ntBASIC2.94□□□□□ -1.94
APOEP02649 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.94□□□□□ -1.94
APOEP02649 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
APOEP02649 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.93□□□□□ -1.94
APOEP02649 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
APOEP02649 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
APOEP02649 AL161431.1-201ENST00000618966 4205 ntBASIC2.93□□□□□ -1.94
APOEP02649 DEFB109C-201ENST00000382575 264 ntBASIC2.93□□□□□ -1.94
APOEP02649 DEFB109B-201ENST00000382656 264 ntBASIC2.93□□□□□ -1.94
APOEP02649 RNU1-109P-201ENST00000383960 147 ntBASIC2.93□□□□□ -1.94
APOEP02649 SNORA18.3-201ENST00000384122 132 ntBASIC2.93□□□□□ -1.94
APOEP02649 MIR181A2-201ENST00000384863 110 ntBASIC2.93□□□□□ -1.94
APOEP02649 AL590004.2-201ENST00000404787 371 ntBASIC2.93□□□□□ -1.94
APOEP02649 SNORD88.1-201ENST00000408684 91 ntBASIC2.93□□□□□ -1.94
APOEP02649 RNA5SP129-201ENST00000410276 118 ntBASIC2.93□□□□□ -1.94
APOEP02649 AL096701.2-201ENST00000416920 238 ntBASIC2.93□□□□□ -1.94
APOEP02649 MTCYBP24-201ENST00000420387 1106 ntBASIC2.93□□□□□ -1.94
APOEP02649 AC087499.2-201ENST00000432861 149 ntBASIC2.93□□□□□ -1.94
APOEP02649 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
APOEP02649 AC025750.2-201ENST00000442609 450 ntBASIC2.93□□□□□ -1.94
APOEP02649 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.93□□□□□ -1.94
APOEP02649 GSTA11P-201ENST00000452866 669 ntBASIC2.93□□□□□ -1.94
APOEP02649 AC008571.1-201ENST00000467232 300 ntBASIC2.93□□□□□ -1.94
APOEP02649 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.93□□□□□ -1.94
APOEP02649 RN7SKP283-201ENST00000517197 270 ntBASIC2.93□□□□□ -1.94
APOEP02649 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.93□□□□□ -1.94
APOEP02649 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.93□□□□□ -1.94
APOEP02649 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.93□□□□□ -1.94
APOEP02649 AC006504.3-201ENST00000586818 523 ntBASIC2.93□□□□□ -1.94
APOEP02649 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.93□□□□□ -1.94
APOEP02649 VN1R92P-201ENST00000598511 928 ntBASIC2.93□□□□□ -1.94
APOEP02649 U73479.1-201ENST00000618062 168 ntBASIC2.93□□□□□ -1.94
APOEP02649 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
APOEP02649 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.93□□□□□ -1.94
APOEP02649 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOEP02649 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
APOEP02649 AC006378.2-201ENST00000623178 2476 ntBASIC2.92□□□□□ -1.94
APOEP02649 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOEP02649 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
APOEP02649 VTRNA1-1-201ENST00000363120 99 ntBASIC2.92□□□□□ -1.94
APOEP02649 PRRC2CP1-201ENST00000404428 159 ntBASIC2.92□□□□□ -1.94
APOEP02649 AC109780.2-201ENST00000413467 845 ntBASIC2.92□□□□□ -1.94
APOEP02649 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.92□□□□□ -1.94
APOEP02649 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.92□□□□□ -1.94
APOEP02649 RPL7P29-201ENST00000437151 728 ntBASIC2.92□□□□□ -1.94
APOEP02649 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.92□□□□□ -1.94
APOEP02649 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.92□□□□□ -1.94
APOEP02649 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.92□□□□□ -1.94
APOEP02649 HMGB1P3-201ENST00000502802 616 ntBASIC2.92□□□□□ -1.94
APOEP02649 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOEP02649 MTCYBP37-201ENST00000510642 1133 ntBASIC2.92□□□□□ -1.94
APOEP02649 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.92□□□□□ -1.94
APOEP02649 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.92□□□□□ -1.94
APOEP02649 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.92□□□□□ -1.94
APOEP02649 AP000857.1-201ENST00000532151 543 ntBASIC2.92□□□□□ -1.94
APOEP02649 AC139103.1-201ENST00000534696 1030 ntBASIC2.92□□□□□ -1.94
APOEP02649 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.92□□□□□ -1.94
APOEP02649 AC106782.4-201ENST00000568264 210 ntBASIC2.92□□□□□ -1.94
APOEP02649 AC091057.2-201ENST00000602594 792 ntBASIC2.92□□□□□ -1.94
APOEP02649 AL355493.4-201ENST00000618530 292 ntBASIC2.92□□□□□ -1.94
APOEP02649 AP000676.4-201ENST00000624659 623 ntBASIC2.92□□□□□ -1.94
APOEP02649 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOEP02649 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.92□□□□□ -1.94
APOEP02649 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
APOEP02649 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOEP02649 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
APOEP02649 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.92□□□□□ -1.94
APOEP02649 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
APOEP02649 ASNSP3-201ENST00000451989 1306 ntBASIC2.92□□□□□ -1.94
APOEP02649 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.92□□□□□ -1.94
APOEP02649 FAM35BP-202ENST00000497389 3337 ntBASIC2.91□□□□□ -1.94
APOEP02649 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOEP02649 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOEP02649 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
APOEP02649 RPL17P50-201ENST00000396131 546 ntBASIC2.91□□□□□ -1.94
APOEP02649 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.91□□□□□ -1.94
APOEP02649 AC005189.1-201ENST00000431286 310 ntBASIC2.91□□□□□ -1.94
APOEP02649 AC105272.1-201ENST00000438604 198 ntBASIC2.91□□□□□ -1.94
APOEP02649 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.91□□□□□ -1.94
APOEP02649 RPL17P49-201ENST00000443728 411 ntBASIC2.91□□□□□ -1.94
APOEP02649 AC112653.1-201ENST00000443851 386 ntBASIC2.91□□□□□ -1.94
APOEP02649 SYPL1P1-201ENST00000473622 768 ntBASIC2.91□□□□□ -1.94
APOEP02649 RPL23AP11-201ENST00000475260 469 ntBASIC2.91□□□□□ -1.94
APOEP02649 MTCO3P35-201ENST00000485582 781 ntBASIC2.91□□□□□ -1.94
APOEP02649 AC096576.1-201ENST00000489014 359 ntBASIC2.91□□□□□ -1.94
APOEP02649 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.91□□□□□ -1.94
APOEP02649 DYNLL1P6-201ENST00000503440 264 ntBASIC2.91□□□□□ -1.94
APOEP02649 HMGB1P47-201ENST00000511281 589 ntBASIC2.91□□□□□ -1.94
APOEP02649 RPL7L1P13-201ENST00000511702 739 ntBASIC2.91□□□□□ -1.94
APOEP02649 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.91□□□□□ -1.94
APOEP02649 AC091826.1-201ENST00000514065 313 ntBASIC2.91□□□□□ -1.94
APOEP02649 AC026801.2-201ENST00000515352 425 ntBASIC2.91□□□□□ -1.94
APOEP02649 RNU6-826P-201ENST00000516827 104 ntBASIC2.91□□□□□ -1.94
APOEP02649 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms