Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL3A1P02461 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL3A1P02461 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL3A1P02461 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.65□□□□□ -1.66
COL3A1P02461 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL3A1P02461 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.66
COL3A1P02461 RNU4-21P-201ENST00000362802 126 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.65□□□□□ -1.66
COL3A1P02461 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
COL3A1P02461 Y_RNA.408-201ENST00000383987 102 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 RPS15AP38-201ENST00000413110 372 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.65□□□□□ -1.66
COL3A1P02461 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.65□□□□□ -1.66
COL3A1P02461 RPS7P15-201ENST00000415804 584 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.65□□□□□ -1.66
COL3A1P02461 AL139421.1-201ENST00000423010 169 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 DPY19L1P2-201ENST00000426647 915 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 AC010975.2-201ENST00000427781 588 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 AC017083.1-201ENST00000428093 483 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 MTND4LP16-201ENST00000440828 295 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 AL118496.2-201ENST00000448300 230 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 NPM1P39-201ENST00000449818 867 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.65□□□□□ -1.66
COL3A1P02461 RNU7-157P-201ENST00000459600 66 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 AC117522.1-201ENST00000509821 380 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 AC005798.1-201ENST00000513715 387 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 RNU6-718P-201ENST00000516166 105 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.65□□□□□ -1.66
COL3A1P02461 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.65□□□□□ -1.66
COL3A1P02461 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.65□□□□□ -1.66
COL3A1P02461 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.65□□□□□ -1.66
COL3A1P02461 ANP32BP3-201ENST00000559213 706 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 FGF7P1-201ENST00000582820 288 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.65□□□□□ -1.66
COL3A1P02461 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.65□□□□□ -1.66
COL3A1P02461 C8orf59P2-201ENST00000603441 271 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.65□□□□□ -1.66
COL3A1P02461 AL442067.2-201ENST00000614033 363 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 AC022509.4-201ENST00000621404 572 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.65□□□□□ -1.66
COL3A1P02461 AC004009.2-201ENST00000623016 728 ntBASIC4.65□□□□□ -1.66
COL3A1P02461 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.65□□□□□ -1.66
COL3A1P02461 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL3A1P02461 MTND4P16-201ENST00000466108 1367 ntBASIC4.65□□□□□ -1.67
COL3A1P02461 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.65□□□□□ -1.67
COL3A1P02461 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COL3A1P02461 AC005539.1-201ENST00000443768 1479 ntBASIC4.65□□□□□ -1.67
COL3A1P02461 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.65□□□□□ -1.67
COL3A1P02461 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL3A1P02461 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL3A1P02461 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL3A1P02461 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.65□□□□□ -1.67
COL3A1P02461 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
COL3A1P02461 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL3A1P02461 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
COL3A1P02461 Y_RNA.61-201ENST00000362835 102 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 RNU6-1251P-201ENST00000364502 107 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 MIR218-2-201ENST00000385006 110 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL3A1P02461 BTF3P9-201ENST00000418784 283 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 AC023128.2-201ENST00000420880 1223 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.64□□□□□ -1.67
COL3A1P02461 RPS20P1-201ENST00000434853 354 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
COL3A1P02461 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.64□□□□□ -1.67
COL3A1P02461 HMGB1P16-201ENST00000447155 540 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 AL050341.1-201ENST00000447743 313 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.64□□□□□ -1.67
COL3A1P02461 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.64□□□□□ -1.67
COL3A1P02461 RPL26P28-201ENST00000451325 435 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 KATNBL1P6-201ENST00000453433 915 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 SNRPGP9-201ENST00000456025 225 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.64□□□□□ -1.67
COL3A1P02461 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.64□□□□□ -1.67
COL3A1P02461 AC012123.2-201ENST00000485809 248 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.64□□□□□ -1.67
COL3A1P02461 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.64□□□□□ -1.67
COL3A1P02461 AC026784.1-201ENST00000507986 352 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.64□□□□□ -1.67
COL3A1P02461 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.64□□□□□ -1.67
COL3A1P02461 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.64□□□□□ -1.67
COL3A1P02461 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.64□□□□□ -1.67
COL3A1P02461 GMPSP1-201ENST00000514075 579 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.64□□□□□ -1.67
COL3A1P02461 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.64□□□□□ -1.67
COL3A1P02461 DUX4L52-201ENST00000549363 777 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.64□□□□□ -1.67
COL3A1P02461 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.64□□□□□ -1.67
COL3A1P02461 AC083899.3-201ENST00000603413 594 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 AL158211.4-201ENST00000606988 584 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 AC064836.2-201ENST00000609491 462 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 AC007014.2-201ENST00000615581 479 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 AL607023.1-201ENST00000620045 248 ntBASIC4.64□□□□□ -1.67
COL3A1P02461 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL3A1P02461 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COL3A1P02461 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL3A1P02461 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
COL3A1P02461 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL3A1P02461 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms