Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AL162388.1-201ENST00000450912 352 ntBASIC3.44□□□□□ -1.86
POLR1AO95602 AC021269.2-201ENST00000532318 330 ntBASIC3.44□□□□□ -1.86
POLR1AO95602 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.44□□□□□ -1.86
POLR1AO95602 AL137072.1-201ENST00000603444 466 ntBASIC3.44□□□□□ -1.86
POLR1AO95602 AC010297.1-201ENST00000623948 149 ntBASIC3.44□□□□□ -1.86
POLR1AO95602 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
POLR1AO95602 Y_RNA.40-201ENST00000362645 93 ntBASIC3.44□□□□□ -1.86
POLR1AO95602 U8.13-201ENST00000390842 128 ntBASIC3.44□□□□□ -1.86
POLR1AO95602 SAR1AP2-201ENST00000392696 594 ntBASIC3.44□□□□□ -1.86
POLR1AO95602 MIR1287-201ENST00000408492 90 ntBASIC3.44□□□□□ -1.86
POLR1AO95602 RPL23AP42-201ENST00000471152 471 ntBASIC3.44□□□□□ -1.86
POLR1AO95602 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.44□□□□□ -1.86
POLR1AO95602 RNU6ATAC39P-201ENST00000516309 149 ntBASIC3.44□□□□□ -1.86
POLR1AO95602 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.44□□□□□ -1.86
POLR1AO95602 AP001521.1-201ENST00000609150 300 ntBASIC3.44□□□□□ -1.86
POLR1AO95602 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.44□□□□□ -1.86
POLR1AO95602 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
POLR1AO95602 ZNF355P-201ENST00000427301 3216 ntBASIC3.44□□□□□ -1.86
POLR1AO95602 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.43□□□□□ -1.86
POLR1AO95602 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
POLR1AO95602 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.43□□□□□ -1.86
POLR1AO95602 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
POLR1AO95602 SNORD21-201ENST00000383953 95 ntBASIC3.43□□□□□ -1.86
POLR1AO95602 RN7SKP140-201ENST00000411196 284 ntBASIC3.43□□□□□ -1.86
POLR1AO95602 HMGB1P11-201ENST00000413899 637 ntBASIC3.43□□□□□ -1.86
POLR1AO95602 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.43□□□□□ -1.86
POLR1AO95602 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.43□□□□□ -1.86
POLR1AO95602 AL627309.6-201ENST00000606857 840 ntBASIC3.43□□□□□ -1.86
POLR1AO95602 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
POLR1AO95602 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
POLR1AO95602 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
POLR1AO95602 RPL23AP36-201ENST00000413895 458 ntBASIC3.42□□□□□ -1.86
POLR1AO95602 USP9YP20-201ENST00000419224 558 ntBASIC3.42□□□□□ -1.86
POLR1AO95602 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.42□□□□□ -1.86
POLR1AO95602 FAM92A1P2-202ENST00000504766 877 ntBASIC3.42□□□□□ -1.86
POLR1AO95602 AC026412.2-201ENST00000512270 1075 ntBASIC3.42□□□□□ -1.86
POLR1AO95602 AC108729.3-201ENST00000513484 108 ntBASIC3.42□□□□□ -1.86
POLR1AO95602 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.42□□□□□ -1.86
POLR1AO95602 AP003467.2-201ENST00000520175 319 ntBASIC3.42□□□□□ -1.86
POLR1AO95602 AC078814.3-201ENST00000553036 491 ntBASIC3.42□□□□□ -1.86
POLR1AO95602 AC061975.8-201ENST00000587058 721 ntBASIC3.42□□□□□ -1.86
POLR1AO95602 AC009501.3-201ENST00000605001 1352 ntBASIC3.42□□□□□ -1.86
POLR1AO95602 SNORA41-201ENST00000384675 132 ntBASIC3.41□□□□□ -1.86
POLR1AO95602 AL158825.1-201ENST00000414735 521 ntBASIC3.41□□□□□ -1.86
POLR1AO95602 AC010881.1-201ENST00000433830 235 ntBASIC3.41□□□□□ -1.86
POLR1AO95602 AL357520.1-201ENST00000441557 453 ntBASIC3.41□□□□□ -1.86
POLR1AO95602 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.41□□□□□ -1.86
POLR1AO95602 RNA5SP445-201ENST00000515889 115 ntBASIC3.41□□□□□ -1.86
POLR1AO95602 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.41□□□□□ -1.86
POLR1AO95602 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.41□□□□□ -1.86
POLR1AO95602 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
POLR1AO95602 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
POLR1AO95602 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
POLR1AO95602 RNU6-321P-201ENST00000410912 106 ntBASIC3.41□□□□□ -1.86
POLR1AO95602 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
POLR1AO95602 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.41□□□□□ -1.86
POLR1AO95602 NDUFB4P9-201ENST00000511646 388 ntBASIC3.41□□□□□ -1.86
POLR1AO95602 MIR3670-2-201ENST00000582974 65 ntBASIC3.41□□□□□ -1.86
POLR1AO95602 MIR3670-1-201ENST00000584160 65 ntBASIC3.41□□□□□ -1.86
POLR1AO95602 MIR3670-3-201ENST00000584855 65 ntBASIC3.41□□□□□ -1.86
POLR1AO95602 MIR3670-4-201ENST00000612260 65 ntBASIC3.41□□□□□ -1.86
POLR1AO95602 AC116158.1-201ENST00000560231 2129 ntBASIC3.41□□□□□ -1.86
POLR1AO95602 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
POLR1AO95602 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.4□□□□□ -1.86
POLR1AO95602 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
POLR1AO95602 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.4□□□□□ -1.86
POLR1AO95602 Y_RNA.796-201ENST00000364268 102 ntBASIC3.4□□□□□ -1.87
POLR1AO95602 Y_RNA.799-201ENST00000364992 102 ntBASIC3.4□□□□□ -1.87
POLR1AO95602 SETP10-201ENST00000424368 814 ntBASIC3.4□□□□□ -1.87
POLR1AO95602 MTCYBP14-201ENST00000457471 715 ntBASIC3.4□□□□□ -1.87
POLR1AO95602 AC004263.1-201ENST00000479327 332 ntBASIC3.4□□□□□ -1.87
POLR1AO95602 RPL23AP49-201ENST00000492925 468 ntBASIC3.4□□□□□ -1.87
POLR1AO95602 ATG10-AS1-201ENST00000504846 648 ntBASIC3.4□□□□□ -1.87
POLR1AO95602 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.4□□□□□ -1.87
POLR1AO95602 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.4□□□□□ -1.87
POLR1AO95602 AC135628.1-201ENST00000568867 534 ntBASIC3.4□□□□□ -1.87
POLR1AO95602 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.4□□□□□ -1.87
POLR1AO95602 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.4□□□□□ -1.87
POLR1AO95602 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
POLR1AO95602 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
POLR1AO95602 CUL1P1-201ENST00000509510 2425 ntBASIC3.4□□□□□ -1.87
POLR1AO95602 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.39□□□□□ -1.87
POLR1AO95602 AC073310.1-201ENST00000423226 1033 ntBASIC3.39□□□□□ -1.87
POLR1AO95602 CR769767.1-201ENST00000436337 346 ntBASIC3.39□□□□□ -1.87
POLR1AO95602 CACYBPP1-201ENST00000438592 684 ntBASIC3.39□□□□□ -1.87
POLR1AO95602 AL354710.1-201ENST00000453641 246 ntBASIC3.39□□□□□ -1.87
POLR1AO95602 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.39□□□□□ -1.87
POLR1AO95602 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.39□□□□□ -1.87
POLR1AO95602 AC021733.2-201ENST00000518830 497 ntBASIC3.39□□□□□ -1.87
POLR1AO95602 AC090695.1-201ENST00000561269 1222 ntBASIC3.39□□□□□ -1.87
POLR1AO95602 AC091488.1-201ENST00000604239 660 ntBASIC3.39□□□□□ -1.87
POLR1AO95602 AP004247.3-201ENST00000608682 624 ntBASIC3.39□□□□□ -1.87
POLR1AO95602 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
POLR1AO95602 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
POLR1AO95602 AC025125.1-201ENST00000624743 1922 ntBASIC3.39□□□□□ -1.87
POLR1AO95602 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.39□□□□□ -1.87
POLR1AO95602 GABPAP-201ENST00000419271 1356 ntBASIC3.39□□□□□ -1.87
POLR1AO95602 AL512646.1-201ENST00000269395 1077 ntBASIC3.39□□□□□ -1.87
POLR1AO95602 U8.8-201ENST00000365399 135 ntBASIC3.39□□□□□ -1.87
POLR1AO95602 Y_RNA.508-201ENST00000384502 114 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms