Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.81□□□□□ -1.8
CACNA1FO60840 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.81□□□□□ -1.8
CACNA1FO60840 BMS1P7-201ENST00000602440 1052 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 AF131215.7-201ENST00000602443 707 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 uc_338.1-201ENST00000612113 180 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 AC009318.3-201ENST00000616916 503 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 AC243756.2-201ENST00000618406 463 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 AC073569.3-201ENST00000619055 682 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.81□□□□□ -1.8
CACNA1FO60840 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CACNA1FO60840 MTND5P11-201ENST00000511037 1812 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CACNA1FO60840 AC093719.1-202ENST00000392735 373 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CACNA1FO60840 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.8□□□□□ -1.8
CACNA1FO60840 RAC1P8-201ENST00000427086 527 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.8□□□□□ -1.8
CACNA1FO60840 UBE2D3P1-201ENST00000436669 444 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.8□□□□□ -1.8
CACNA1FO60840 HSFY3P-201ENST00000444242 1191 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AC125238.1-201ENST00000448842 249 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AL162389.1-201ENST00000449233 177 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 SUMO1P1-201ENST00000497904 306 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AC114967.1-201ENST00000504890 259 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.8□□□□□ -1.8
CACNA1FO60840 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.8□□□□□ -1.8
CACNA1FO60840 MTCO2P15-201ENST00000532655 656 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.8□□□□□ -1.8
CACNA1FO60840 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.8□□□□□ -1.8
CACNA1FO60840 HMGB3P26-201ENST00000560051 582 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AP005136.1-201ENST00000579765 429 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 VIS1.1-201ENST00000610517 203 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AL138478.1-201ENST00000612252 832 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AC123767.1-202ENST00000620407 817 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
CACNA1FO60840 MTND4P5-201ENST00000435821 1374 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CACNA1FO60840 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CACNA1FO60840 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CACNA1FO60840 Z73965.1-201ENST00000623412 2297 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.8□□□□□ -1.8
CACNA1FO60840 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CACNA1FO60840 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CACNA1FO60840 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.8□□□□□ -1.8
CACNA1FO60840 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.8□□□□□ -1.8
CACNA1FO60840 MUPP-201ENST00000438111 566 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AC016696.1-201ENST00000446949 318 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 HMGB3P8-201ENST00000449709 577 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.8□□□□□ -1.8
CACNA1FO60840 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.8□□□□□ -1.8
CACNA1FO60840 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.8□□□□□ -1.8
CACNA1FO60840 GMPSP1-201ENST00000514075 579 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.8□□□□□ -1.8
CACNA1FO60840 OR5G4P-201ENST00000525251 760 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AC006518.2-201ENST00000542513 940 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AC087897.1-201ENST00000550134 156 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.8□□□□□ -1.8
CACNA1FO60840 NBR2-204ENST00000587322 63 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AL035411.2-201ENST00000604022 421 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 PRELID3BP8-201ENST00000604148 295 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AC011939.3-201ENST00000613686 466 ntBASIC3.8□□□□□ -1.8
CACNA1FO60840 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.8□□□□□ -1.8
CACNA1FO60840 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CACNA1FO60840 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
CACNA1FO60840 SNORD56.4-201ENST00000363883 71 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 Y_RNA.436-201ENST00000384097 102 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 SNORA48.2-201ENST00000390926 124 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 HMGB1P10-201ENST00000395823 563 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 AL078595.1-201ENST00000404458 226 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 AL356131.1-201ENST00000405826 414 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 RN7SKP58-201ENST00000411010 305 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 AL031779.1-201ENST00000415663 330 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 AL593851.1-201ENST00000426171 157 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.79□□□□□ -1.8
CACNA1FO60840 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.79□□□□□ -1.8
CACNA1FO60840 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.79□□□□□ -1.8
CACNA1FO60840 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.79□□□□□ -1.8
CACNA1FO60840 RNU7-125P-201ENST00000458760 62 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.79□□□□□ -1.8
CACNA1FO60840 RPL21P131-201ENST00000497298 483 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.79□□□□□ -1.8
CACNA1FO60840 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.79□□□□□ -1.8
CACNA1FO60840 AC008494.2-201ENST00000514544 370 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 AC090819.1-201ENST00000523800 1111 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 NDUFS5P6-201ENST00000529136 295 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.79□□□□□ -1.8
CACNA1FO60840 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.79□□□□□ -1.8
CACNA1FO60840 AC106782.4-201ENST00000568264 210 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CACNA1FO60840 AL121895.2-201ENST00000619558 447 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 AC145207.9-201ENST00000623802 325 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 AC017037.3-201ENST00000625016 472 ntBASIC3.79□□□□□ -1.8
CACNA1FO60840 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.79□□□□□ -1.8
CACNA1FO60840 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CACNA1FO60840 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.79□□□□□ -1.8
CACNA1FO60840 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CACNA1FO60840 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA1FO60840 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms