Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 COX6CP8-201ENST00000522620 226 ntBASIC3.66□□□□□ -1.82
SSX4O60224 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX4O60224 OR6C7P-201ENST00000547875 934 ntBASIC3.66□□□□□ -1.82
SSX4O60224 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX4O60224 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX4O60224 AC090888.1-201ENST00000561335 1141 ntBASIC3.66□□□□□ -1.82
SSX4O60224 AC136618.2-201ENST00000575091 400 ntBASIC3.66□□□□□ -1.82
SSX4O60224 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.66□□□□□ -1.82
SSX4O60224 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX4O60224 AC022916.3-201ENST00000592961 742 ntBASIC3.66□□□□□ -1.82
SSX4O60224 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.66□□□□□ -1.82
SSX4O60224 AL451044.1-201ENST00000604867 238 ntBASIC3.66□□□□□ -1.82
SSX4O60224 MIR92B-201ENST00000607575 96 ntBASIC3.66□□□□□ -1.82
SSX4O60224 AC072039.2-201ENST00000608883 439 ntBASIC3.66□□□□□ -1.82
SSX4O60224 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX4O60224 AC034229.5-201ENST00000624258 185 ntBASIC3.66□□□□□ -1.82
SSX4O60224 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX4O60224 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SSX4O60224 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.66□□□□□ -1.82
SSX4O60224 AC006504.1-201ENST00000562493 3666 ntBASIC3.66□□□□□ -1.82
SSX4O60224 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSX4O60224 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSX4O60224 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
SSX4O60224 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.65□□□□□ -1.82
SSX4O60224 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
SSX4O60224 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.65□□□□□ -1.82
SSX4O60224 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SSX4O60224 RNU6-28P-201ENST00000362378 107 ntBASIC3.65□□□□□ -1.83
SSX4O60224 RNU6-1249P-201ENST00000363237 111 ntBASIC3.65□□□□□ -1.83
SSX4O60224 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SSX4O60224 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSX4O60224 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.65□□□□□ -1.83
SSX4O60224 AC092447.6-201ENST00000414578 210 ntBASIC3.65□□□□□ -1.83
SSX4O60224 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.65□□□□□ -1.83
SSX4O60224 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX4O60224 AIMP1P1-201ENST00000418670 937 ntBASIC3.65□□□□□ -1.83
SSX4O60224 AL117339.2-201ENST00000430475 180 ntBASIC3.65□□□□□ -1.83
SSX4O60224 COX6B1P7-201ENST00000430845 235 ntBASIC3.65□□□□□ -1.83
SSX4O60224 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.65□□□□□ -1.83
SSX4O60224 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.65□□□□□ -1.83
SSX4O60224 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX4O60224 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.65□□□□□ -1.83
SSX4O60224 AC114495.1-201ENST00000441274 436 ntBASIC3.65□□□□□ -1.83
SSX4O60224 AL512326.1-201ENST00000443050 721 ntBASIC3.65□□□□□ -1.83
SSX4O60224 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX4O60224 snoU109.4-201ENST00000458953 143 ntBASIC3.65□□□□□ -1.83
SSX4O60224 RPL9P32-201ENST00000464118 620 ntBASIC3.65□□□□□ -1.83
SSX4O60224 RPS4XP10-201ENST00000465034 731 ntBASIC3.65□□□□□ -1.83
SSX4O60224 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX4O60224 AL132838.2-201ENST00000492041 314 ntBASIC3.65□□□□□ -1.83
SSX4O60224 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX4O60224 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.65□□□□□ -1.83
SSX4O60224 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.65□□□□□ -1.83
SSX4O60224 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX4O60224 MTND1P22-201ENST00000510572 951 ntBASIC3.65□□□□□ -1.83
SSX4O60224 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.65□□□□□ -1.83
SSX4O60224 RNA5SP519-201ENST00000516480 119 ntBASIC3.65□□□□□ -1.83
SSX4O60224 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.65□□□□□ -1.83
SSX4O60224 AC023632.4-201ENST00000517783 191 ntBASIC3.65□□□□□ -1.83
SSX4O60224 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.65□□□□□ -1.83
SSX4O60224 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX4O60224 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.65□□□□□ -1.83
SSX4O60224 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX4O60224 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX4O60224 AC091515.1-201ENST00000548110 679 ntBASIC3.65□□□□□ -1.83
SSX4O60224 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.65□□□□□ -1.83
SSX4O60224 AC099489.2-201ENST00000574976 260 ntBASIC3.65□□□□□ -1.83
SSX4O60224 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX4O60224 AC004223.4-201ENST00000612426 332 ntBASIC3.65□□□□□ -1.83
SSX4O60224 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSX4O60224 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSX4O60224 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.65□□□□□ -1.83
SSX4O60224 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.65□□□□□ -1.83
SSX4O60224 FP325313.1-201ENST00000638228 703 ntBASIC3.65□□□□□ -1.83
SSX4O60224 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SSX4O60224 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.65□□□□□ -1.83
SSX4O60224 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.65□□□□□ -1.83
SSX4O60224 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSX4O60224 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.64□□□□□ -1.83
SSX4O60224 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSX4O60224 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSX4O60224 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSX4O60224 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
SSX4O60224 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSX4O60224 OR11H4-201ENST00000315409 1082 ntBASIC3.64□□□□□ -1.83
SSX4O60224 RN7SKP280-201ENST00000364196 304 ntBASIC3.64□□□□□ -1.83
SSX4O60224 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.64□□□□□ -1.83
SSX4O60224 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
SSX4O60224 SNORD116-8-201ENST00000384365 95 ntBASIC3.64□□□□□ -1.83
SSX4O60224 RPL32P23-201ENST00000397237 405 ntBASIC3.64□□□□□ -1.83
SSX4O60224 AL583835.1-201ENST00000399570 407 ntBASIC3.64□□□□□ -1.83
SSX4O60224 PPIAP31-201ENST00000405422 495 ntBASIC3.64□□□□□ -1.83
SSX4O60224 RN7SKP202-201ENST00000410439 330 ntBASIC3.64□□□□□ -1.83
SSX4O60224 RPS15AP38-201ENST00000413110 372 ntBASIC3.64□□□□□ -1.83
SSX4O60224 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.64□□□□□ -1.83
SSX4O60224 RPL30P2-201ENST00000414021 291 ntBASIC3.64□□□□□ -1.83
SSX4O60224 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.64□□□□□ -1.83
SSX4O60224 AC108032.1-201ENST00000416706 207 ntBASIC3.64□□□□□ -1.83
SSX4O60224 RBMY1KP-201ENST00000423480 476 ntBASIC3.64□□□□□ -1.83
SSX4O60224 EZH2P1-201ENST00000431167 291 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms