Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 H3F3AP1-201ENST00000559984 334 ntBASIC3.38□□□□□ -1.87
MSH4O15457 AC010735.1-201ENST00000567305 1026 ntBASIC3.38□□□□□ -1.87
MSH4O15457 AC074051.3-201ENST00000570238 358 ntBASIC3.38□□□□□ -1.87
MSH4O15457 AL513477.2-201ENST00000607858 568 ntBASIC3.38□□□□□ -1.87
MSH4O15457 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.38□□□□□ -1.87
MSH4O15457 AC006249.1-201ENST00000621223 471 ntBASIC3.38□□□□□ -1.87
MSH4O15457 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.38□□□□□ -1.87
MSH4O15457 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.38□□□□□ -1.87
MSH4O15457 MIR7153-201ENST00000637758 57 ntBASIC3.38□□□□□ -1.87
MSH4O15457 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
MSH4O15457 AL035425.3-201ENST00000564206 4996 ntBASIC3.38□□□□□ -1.87
MSH4O15457 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.38□□□□□ -1.87
MSH4O15457 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
MSH4O15457 AL359893.1-201ENST00000447628 1580 ntBASIC3.38□□□□□ -1.87
MSH4O15457 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
MSH4O15457 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
MSH4O15457 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
MSH4O15457 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.37□□□□□ -1.87
MSH4O15457 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
MSH4O15457 GNG5P1-201ENST00000255500 204 ntBASIC3.37□□□□□ -1.87
MSH4O15457 RNU1-140P-201ENST00000365040 165 ntBASIC3.37□□□□□ -1.87
MSH4O15457 RNU6-805P-201ENST00000365643 106 ntBASIC3.37□□□□□ -1.87
MSH4O15457 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
MSH4O15457 RNU6-921P-201ENST00000384361 107 ntBASIC3.37□□□□□ -1.87
MSH4O15457 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.37□□□□□ -1.87
MSH4O15457 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.37□□□□□ -1.87
MSH4O15457 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.37□□□□□ -1.87
MSH4O15457 PTP4A1P5-201ENST00000420305 455 ntBASIC3.37□□□□□ -1.87
MSH4O15457 SFR1P2-201ENST00000421841 730 ntBASIC3.37□□□□□ -1.87
MSH4O15457 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.37□□□□□ -1.87
MSH4O15457 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.37□□□□□ -1.87
MSH4O15457 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.37□□□□□ -1.87
MSH4O15457 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.37□□□□□ -1.87
MSH4O15457 NANOGNBP1-201ENST00000448444 480 ntBASIC3.37□□□□□ -1.87
MSH4O15457 RPL37P4-201ENST00000448908 268 ntBASIC3.37□□□□□ -1.87
MSH4O15457 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.37□□□□□ -1.87
MSH4O15457 AC010468.1-201ENST00000461022 817 ntBASIC3.37□□□□□ -1.87
MSH4O15457 AC080014.1-201ENST00000496877 1201 ntBASIC3.37□□□□□ -1.87
MSH4O15457 AC078918.1-201ENST00000498515 228 ntBASIC3.37□□□□□ -1.87
MSH4O15457 AC010374.2-201ENST00000512933 535 ntBASIC3.37□□□□□ -1.87
MSH4O15457 IGKV2D-36-201ENST00000518643 226 ntBASIC3.37□□□□□ -1.87
MSH4O15457 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.37□□□□□ -1.87
MSH4O15457 AC022080.3-201ENST00000544433 482 ntBASIC3.37□□□□□ -1.87
MSH4O15457 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.37□□□□□ -1.87
MSH4O15457 AC011816.2-201ENST00000607089 556 ntBASIC3.37□□□□□ -1.87
MSH4O15457 AC098679.5-201ENST00000624394 571 ntBASIC3.37□□□□□ -1.87
MSH4O15457 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.37□□□□□ -1.87
MSH4O15457 AC006927.2-201ENST00000639256 389 ntBASIC3.37□□□□□ -1.87
MSH4O15457 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
MSH4O15457 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
MSH4O15457 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
MSH4O15457 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
MSH4O15457 ZNF807-201ENST00000328088 1707 ntBASIC3.36□□□□□ -1.87
MSH4O15457 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MSH4O15457 AL592494.2-201ENST00000425455 1548 ntBASIC3.36□□□□□ -1.87
MSH4O15457 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MSH4O15457 RNU5B-4P-201ENST00000363508 111 ntBASIC3.36□□□□□ -1.87
MSH4O15457 SNORA46-201ENST00000384762 135 ntBASIC3.36□□□□□ -1.87
MSH4O15457 UBA52P6-201ENST00000399822 382 ntBASIC3.36□□□□□ -1.87
MSH4O15457 RNA5SP293-201ENST00000410527 113 ntBASIC3.36□□□□□ -1.87
MSH4O15457 HMGB3P23-201ENST00000414981 585 ntBASIC3.36□□□□□ -1.87
MSH4O15457 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.36□□□□□ -1.87
MSH4O15457 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.36□□□□□ -1.87
MSH4O15457 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.36□□□□□ -1.87
MSH4O15457 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.36□□□□□ -1.87
MSH4O15457 AL138799.3-201ENST00000438968 350 ntBASIC3.36□□□□□ -1.87
MSH4O15457 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.36□□□□□ -1.87
MSH4O15457 HMGN1P5-201ENST00000448591 263 ntBASIC3.36□□□□□ -1.87
MSH4O15457 AC125238.1-201ENST00000448842 249 ntBASIC3.36□□□□□ -1.87
MSH4O15457 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.36□□□□□ -1.87
MSH4O15457 RPS29P26-201ENST00000477483 171 ntBASIC3.36□□□□□ -1.87
MSH4O15457 AL049830.2-201ENST00000480072 201 ntBASIC3.36□□□□□ -1.87
MSH4O15457 NCOR1P1-202ENST00000486162 291 ntBASIC3.36□□□□□ -1.87
MSH4O15457 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.36□□□□□ -1.87
MSH4O15457 PRELID3BP6-201ENST00000503839 571 ntBASIC3.36□□□□□ -1.87
MSH4O15457 RN7SKP289-201ENST00000517244 295 ntBASIC3.36□□□□□ -1.87
MSH4O15457 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.36□□□□□ -1.87
MSH4O15457 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.36□□□□□ -1.87
MSH4O15457 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.36□□□□□ -1.87
MSH4O15457 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.36□□□□□ -1.87
MSH4O15457 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.36□□□□□ -1.87
MSH4O15457 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.36□□□□□ -1.87
MSH4O15457 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.36□□□□□ -1.87
MSH4O15457 AC087894.1-201ENST00000538359 518 ntBASIC3.36□□□□□ -1.87
MSH4O15457 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MSH4O15457 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.36□□□□□ -1.87
MSH4O15457 MIR3186-201ENST00000577404 85 ntBASIC3.36□□□□□ -1.87
MSH4O15457 AC010928.3-201ENST00000587712 541 ntBASIC3.36□□□□□ -1.87
MSH4O15457 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.36□□□□□ -1.87
MSH4O15457 AL451007.1-201ENST00000595491 289 ntBASIC3.36□□□□□ -1.87
MSH4O15457 VN1R92P-201ENST00000598511 928 ntBASIC3.36□□□□□ -1.87
MSH4O15457 AC092574.1-201ENST00000609771 420 ntBASIC3.36□□□□□ -1.87
MSH4O15457 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.36□□□□□ -1.87
MSH4O15457 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MSH4O15457 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.36□□□□□ -1.87
MSH4O15457 AC092628.2-201ENST00000622492 339 ntBASIC3.36□□□□□ -1.87
MSH4O15457 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MSH4O15457 AL355578.1-201ENST00000607405 1328 ntBASIC3.36□□□□□ -1.87
MSH4O15457 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
MSH4O15457 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms