Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDX4O14627 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDX4O14627 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.25□□□□□ -1.89
CDX4O14627 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CDX4O14627 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDX4O14627 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDX4O14627 AC008725.1-201ENST00000605123 2263 ntBASIC3.24□□□□□ -1.89
CDX4O14627 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDX4O14627 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.24□□□□□ -1.89
CDX4O14627 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CDX4O14627 AL355578.1-201ENST00000607405 1328 ntBASIC3.24□□□□□ -1.89
CDX4O14627 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDX4O14627 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDX4O14627 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CDX4O14627 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDX4O14627 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CDX4O14627 XIAPP3-201ENST00000312918 795 ntBASIC3.24□□□□□ -1.89
CDX4O14627 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CDX4O14627 FTLP6-201ENST00000355274 422 ntBASIC3.24□□□□□ -1.89
CDX4O14627 RNA5SP52-201ENST00000362448 134 ntBASIC3.24□□□□□ -1.89
CDX4O14627 RNU6-839P-201ENST00000363347 108 ntBASIC3.24□□□□□ -1.89
CDX4O14627 RNU6-115P-201ENST00000364310 107 ntBASIC3.24□□□□□ -1.89
CDX4O14627 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
CDX4O14627 AL139098.1-201ENST00000407291 389 ntBASIC3.24□□□□□ -1.89
CDX4O14627 ELOCP18-201ENST00000434209 337 ntBASIC3.24□□□□□ -1.89
CDX4O14627 USP9YP24-201ENST00000434374 697 ntBASIC3.24□□□□□ -1.89
CDX4O14627 B3GNT2P1-201ENST00000434960 952 ntBASIC3.24□□□□□ -1.89
CDX4O14627 AC092393.1-201ENST00000439625 742 ntBASIC3.24□□□□□ -1.89
CDX4O14627 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.24□□□□□ -1.89
CDX4O14627 USP9YP17-201ENST00000444617 696 ntBASIC3.24□□□□□ -1.89
CDX4O14627 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.24□□□□□ -1.89
CDX4O14627 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CDX4O14627 AC092155.2-201ENST00000454675 477 ntBASIC3.24□□□□□ -1.89
CDX4O14627 AC087879.1-201ENST00000474343 374 ntBASIC3.24□□□□□ -1.89
CDX4O14627 DYNLL1P6-201ENST00000503440 264 ntBASIC3.24□□□□□ -1.89
CDX4O14627 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.24□□□□□ -1.89
CDX4O14627 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDX4O14627 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.24□□□□□ -1.89
CDX4O14627 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.24□□□□□ -1.89
CDX4O14627 RNU6-311P-201ENST00000516224 102 ntBASIC3.24□□□□□ -1.89
CDX4O14627 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDX4O14627 PSMA2P1-201ENST00000526365 646 ntBASIC3.24□□□□□ -1.89
CDX4O14627 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.24□□□□□ -1.89
CDX4O14627 DUXAP5-201ENST00000529668 529 ntBASIC3.24□□□□□ -1.89
CDX4O14627 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.24□□□□□ -1.89
CDX4O14627 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.24□□□□□ -1.89
CDX4O14627 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.24□□□□□ -1.89
CDX4O14627 HIGD1AP1-201ENST00000550979 275 ntBASIC3.24□□□□□ -1.89
CDX4O14627 AC005476.1-201ENST00000554427 397 ntBASIC3.24□□□□□ -1.89
CDX4O14627 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.24□□□□□ -1.89
CDX4O14627 EIF5A2P1-201ENST00000564027 460 ntBASIC3.24□□□□□ -1.89
CDX4O14627 MTCYBP28-201ENST00000566728 1132 ntBASIC3.24□□□□□ -1.89
CDX4O14627 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.24□□□□□ -1.89
CDX4O14627 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.24□□□□□ -1.89
CDX4O14627 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.24□□□□□ -1.89
CDX4O14627 AC103858.2-201ENST00000621471 543 ntBASIC3.24□□□□□ -1.89
CDX4O14627 AC011330.2-201ENST00000621680 635 ntBASIC3.24□□□□□ -1.89
CDX4O14627 AL157770.1-201ENST00000623049 439 ntBASIC3.24□□□□□ -1.89
CDX4O14627 AC018692.3-201ENST00000623929 123 ntBASIC3.24□□□□□ -1.89
CDX4O14627 AC019226.2-201ENST00000625973 424 ntBASIC3.24□□□□□ -1.89
CDX4O14627 MFSD8-245ENST00000641743 948 ntBASIC3.24□□□□□ -1.89
CDX4O14627 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDX4O14627 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDX4O14627 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDX4O14627 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
CDX4O14627 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDX4O14627 AL031985.3-201ENST00000565390 2449 ntBASIC3.23□□□□□ -1.89
CDX4O14627 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CDX4O14627 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.23□□□□□ -1.89
CDX4O14627 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDX4O14627 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDX4O14627 RNA5SP432-201ENST00000362480 116 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.23□□□□□ -1.89
CDX4O14627 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.23□□□□□ -1.89
CDX4O14627 SNORA48.8-201ENST00000391324 134 ntBASIC3.23□□□□□ -1.89
CDX4O14627 MTCO3P31-201ENST00000405526 789 ntBASIC3.23□□□□□ -1.89
CDX4O14627 RNU2-21P-201ENST00000410368 188 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AC069218.2-201ENST00000411665 344 ntBASIC3.23□□□□□ -1.89
CDX4O14627 RPS3AP9-201ENST00000417027 792 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.23□□□□□ -1.89
CDX4O14627 AC005005.2-201ENST00000420779 380 ntBASIC3.23□□□□□ -1.89
CDX4O14627 RPL7P53-201ENST00000421245 739 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.23□□□□□ -1.89
CDX4O14627 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.23□□□□□ -1.89
CDX4O14627 C1DP1-201ENST00000426049 402 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AC096632.1-201ENST00000427395 310 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AL353705.1-201ENST00000433468 480 ntBASIC3.23□□□□□ -1.89
CDX4O14627 MRPS18BP2-201ENST00000434310 759 ntBASIC3.23□□□□□ -1.89
CDX4O14627 YWHAZP8-201ENST00000436935 731 ntBASIC3.23□□□□□ -1.89
CDX4O14627 HMGB1P16-201ENST00000447155 540 ntBASIC3.23□□□□□ -1.89
CDX4O14627 MTCYBP11-201ENST00000447254 1109 ntBASIC3.23□□□□□ -1.89
CDX4O14627 NDUFA5P7-201ENST00000452914 242 ntBASIC3.23□□□□□ -1.89
CDX4O14627 RN7SL863P-201ENST00000462370 296 ntBASIC3.23□□□□□ -1.89
CDX4O14627 MTCO2P6-201ENST00000463134 685 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.23□□□□□ -1.89
CDX4O14627 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CDX4O14627 AC134050.1-201ENST00000495088 933 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.23□□□□□ -1.89
CDX4O14627 BOLA3P3-201ENST00000505182 232 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms